Detail



ID : Ahg489345

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489345|fgenesh2_kg.6__2479__AT5G24820.1
Sequence
ATGGTTTCAC CAAATCCACT AATTTTTCTT CTTCTGCTCC TCTTCATAGT ACTAACTCAT AACTCTAGCC TTGAAGATGA TCTCCCGAAT GATATACCAA ACGGCTTCTA CTTACCTTTC GAATCTAATC TTTACGTTGA GATCACCATT GGAACCCCAA CGCGAACCTT TAACCTCAAA CTAGACTCGT CTACACATCT CACATGCCTT GATAATGATG ATGACCACCA ATGCTCACTC TCAGACAAAT CTTCCAACAC TTTCTCTACA ATCTCTTGCA ATAACTCTTC TCTTTGTCCT CATGTCTCCA CCAATTCCAC TAACCATTTC AACACAACAA CAACGAAAAC AACAACTTCT CTATCTCTTC TCTGCACTCC TTCCGATTTC TGCCGCTACG AGGCCTCTCC CTCTAGCTCC GGCTACCTTG TCTCCGACAC ACTTCAGTTA ACTTCCTCAA TCACCGACCA AGAAAACTCT CTCTCCATAG CTCGAGGGTT TGTCTTTGGC TGCGGGGCTA GTAACCGTGC GACGCCGGAG GAAGACGGAG GAGGCGTCGA TGGGAGATTG AGTCTAACAA CTCATCGTTT CTCTTTCCTC TCTCAGCTTC GTCTCACAAG ATTTTCACAT TGTCTTTGGC CTTCCTCCGC CGGGTCGCGT AACTACATCC GTCTCGGATC AGCGGCTTCC TACGGCGGCG ATATGGTGTT GGTTCCGATG TTAAACACGA CGGGGACGGA AGCTTACTCG TATCACGTTG CTCTCTTCGG GATCAGTCTT GCCCAACAGA GAATGAGAAG CAGTGAGACT AGTGGACTAG CAATAGATAT CGGAACCTAC TACACGAGTC TAGAGCCATC ACTCTACGAG GAGGTGAAAG AAGAGCTAAT GGCGCAGATT GGACCAACAG TCGCATACGA AGTGAACGAA CTAATGTGTT TCACAACCGA GGTTGGGTTA GATATAGATT CATTGCCCAA ACTCACTTTT CATTTCCAAG GATACGATTA CACAATCTCA AACAAAGGAC TCTATCTCCG AGACAGCCCA TCTTCTCTCT GCACAGCTTT GGTCAGATCA TCGATGAAAG ATGAGGAAAG GATTAATGTG ATTGGAGCAT CAGCTCTTGT TGATCATGCA GTTGGGTACG ACACTTCACA GAGGATGCTT GCCTTTCAAC AAAGGGATTG TTTATCCGAT TTCGTAGATG GTATGTAA 
Length1218
Protein Sequence
Protein Residue
Map Locationscaffold_6: 10357448.. 10358958
Download Sequence
A.thaliana
AGI-codeAT5G24820.1
DescriptionEukaryotic aspartyl protease family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.3666 Ahg487519 Protein of unknown function, DUF617
23.4094 Ahg926962
23.4947 Ahg948509 transposable element gene
23.6854 Ahg931324
24.9199 Ahg943083
31.3369 Ahg351806 Galactose oxidase/kelch repeat superfamily protein
37.1483 Ahg474043 Oleosin family protein
37.55 Ahg329612 Galactose oxidase/kelch repeat superfamily protein
52.1536 Ahg316416 HCO3- transporter family
52.345 Ahg919270 Pectin lyase-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression