Detail



ID : Ahg329612

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|329612|fgenesh1_pm.C_scaffold_7001839
Sequence
ATGGAACGTG AGGGTTTTCC AAATTCATCA TCTTCAACTA CTCAGGAGAA TCACGAAAAA AGGATCATCG GAGAGTTCGT CTCCGTCACT ATCAACGACG GTAAACAATA CGAAGGCATT ATCTGCCATA TTAATCTTCA AGATTCGACG TTAGGTCTCC AAAACGGTAA CCATTCGATT CCAAACCTTC TCCAAGATCC TAATTTACTG TTTCTGATTT TCTTCTTTTC AATTGTTAGA TGCTATGGAA GAGAGGAGAA GAATGATAAT GAGCAACGAG TAATCCATGT TCTTAAAGAA GCTTACAGTT ACATGCTTTT TAGCGGAAGT GACATTAAGT TACTCGAAGT TCTCTCTCTG CCAGCACCAC CAAAGCATAA ATCTGTCATA GGTCATCTCG TTAGTATAAT AACTACCGGG GACGTGAGGT GTGAGGGCCT AATCACCCAC GTCAACTTTC GTGATTCTAT GATATTCATG AAGAATGGTA TGTGTTATGG TACTGAGGGG AGGACGAAGA GAAGACGTTC AATAGTAGCT TGCAAACAAT TGGCTGATGA CATTATTTTG AATATCTTGG CTCGCATATC CACTTCGTAC TACCCAACGC TCTCTCTTGT CTCCAAGAGC TTCCGCTGGC TCATCCTCTC TGAGGAGCTC GACATGGAAC GTTCCTACCT TGGAACCCGA AAACAATGTG TTTACGTCTG CTTTCAATCT CCCAGCCATC CTTTTGGTCG TAGATGGTTC AGTCTCTGGA TAAAACCCTG CGATCATCAA CCCCTAACCC ATTGGACGAT CGACATCAAG TGTACCGGAC ACTGGTTGCT ACCGATGCCC TCTTCATACT CTCGTCGCTT ACAAACACTC CACGAAACTA TTGGTTCAGA AACATACGAA ATCGGTGGAC AAAACACGCT GCCCTCAACC GACGTGTGGG TCTATGATAA GCTTATTGGC AAACGGTGCA AAGGCCCTAG CATGATGGTG GCTCGTAAGA ATGCCCTTAC ATGCGCACTT GATGGGAAAC TATATGTAAT GGGAGGATGT GAAGCAGATG ATACCACGCA TTGGGCTGAG CTTTTCGACC CAAAGACTCA AACTTGGGAA GCTTTACCGG ATCCTGGTGT TGAGCTCCGG TCCTCTTCAG TTAAAAAGCT CCAAACGAAG CAAGGAAAAG TTTACGTGAG GAGCAATGTG AAGAATTTTG TTTACCTTAC AAAAGAAAGT AGGTGGGAAG TTGCTGAGGG AAACTTAGGT GACCGTGAGA GTATGTGTGA GATAGAGAAT GTATGCTACT CTTATGCTAA TAAAAAATGT TGGTGGTATG ACACAAAATG TGAAGGGTGG AGATCGGTCA AAGGTACTGA TGGTGGAAAA CTCGTAGTCT TTTGGGACCG TGTGGGTTCT CGTATTACTG CAACCAAAGA AATTTGGTGT GCTATGATTT CGCTTAAAAA GGAACCTGAT GGTGAAGTTT GGGGTCACGT TGAGTGGCTT GATGCTGTGC TTATAGCCCC TCGGTCGTAT ACATTCTTGC ATTGTATGGA ATCATTGCAA TGA 
Length1563
Protein Sequence
Protein Residue
Map Locationscaffold_7: 9592461.. 9597368
Download Sequence
A.thaliana
AGI-codeAT4G19330.1
DescriptionGalactose oxidase/kelch repeat superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
18.0555 Ahg920137
20.6882 Ahg358371 Pectin lyase-like superfamily protein
23.4307 Ahg334870 Transducin/WD40 repeat-like superfamily protein
23.8118 Ahg899837 Domain of unknown function (DUF313)
28.3549 Ahg497075 transposable element gene
30.5123 Ahg342380 alternative oxidase 1B
32.2645 Ahg473542 Avirulence induced gene (AIG1) family protein
37.55 Ahg489345 Eukaryotic aspartyl protease family protein
40.2119 Ahg949069 transposable element gene
40.3733 Ahg916260
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression