Detail



ID : Ahg492311

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492311|fgenesh2_kg.7__1744__AT4G25220.1
Sequence
CCATTGAAGT TGAAGAACAG AGAGAGGTAG AGATACTTTT CTCCTCTCTT CAACTTTCAA AGGTGATCTA AATTCCAGGT TTTGGCGTCG CGAGGAGTTG TTAAAGAGAT GGCGTCATGG ACTTCATCCC AGTTCCTGTA TGAAGAAACC AAGCCATGGG GTATTCAGTT CTTGGAACGG TTTAAGCGTT CAGGAAGACT CTCCTTCAAG CAATACCAAG CCCTTGTCTT CATCTTGACC TTTGTCGCCT ACGTCGCCTT CCATGCTGCT CGAAAGCCCA ATAGCATTGT CAAGGGAACG CTTTCCGCAT CAACAATCAA AGGCGGTTGG GCTCCTTTTG ATGGACCCGA TGGACCAGCC TTGCTTGGGC AGATCGACTT GGTTTTCCTC TCTGTCTATG CGGTTGGGAT GTTTGTGGCG GGCCACTTGG GAGATCGTTT GGATCTCAGG ACGTTTCTGA CTATCGGAAT GATCGGGACC GGCCTTTTCA CAGCTCTATT TGGGGTCGCA TTCTGGGCAA ATTTCCACAG CTTCTACTAT TTCTTGGCGG TTCAGGTTAT GGCGGGGTGG TTTCAGTCGA TAGGTTGGCC TTGTGTTGTG GCCGTGCTCG GGAACTGGTT CGACAAGAAG AGAAGAGGAA TGGTTATGGG TGTTTGGAGT GCTCACACTT CCCTCGGTAA CATCGCAGGG TCTCTGATCG CATCTGGGCT GCTTAGATAT GGGTGGGGTT GGTCATTTCT TGGCCCGGCT TTGCTCATGA CTTTTCTTGG GATCGTTGTT TACCTTTTCT TGCCGGTGAA TCCTCCAACC GTTGAGGCTG AGAGAGATGG AACTGAAATT GACTCCACCA TGAGGCTCGG TGACACCATT ACAGAGAGCT TCTTGGAATC TAGAATGAGT ACTGGATTCG ATAGAAAGGC AGTCGGGTTC ATGGCCGCTT GGAAAATCCC CGGTGTTGCT CCTTTCGCCT TCTGCCTCTT CTTCACCAAG TTGGTCTCAT ACACATTCCT CTACTGGCTT CCTTTCTACG TCAGCCACAA CATGATCGGA GGAGAGTACC TGTCTGAGGA GACATCAGGA AACTTGTCAA CAATCTTCGA TGTTGGAGGT GTTGTTGGTG GGGTCTTAGC CGGATACATG TCTGATCAAC TCAACGGCAG AGCGATCACA GCAGCAGGAT TCATGTACTT GGCAATCCCA GCTCTTTTCC TCTACAGAGT CTTGGGACAT ATCTCATTGA CCATCAATGT CATCCTCATG TTCATATCAG GAGTCTTCAT CATTGGACCA TTTGCTCTCA TCACAACAGC TGTCTCAGCT GATCTCGGAA CACACAAATC TCTCAAAGGC AATGCCAGGG CTTTGGCTAC AGTCACAGCT ATCATAGACG GTACAGGATC CGTCGGTGCT GCGATTGGAC CAGTCCTCAC TGGTTACATC TCTGCGATTA GCTGGGACGC AGTGTTTTAC ATGTTGATGA CTGCGGCTTT GATCTCTGGA TTGTTGCTCA CTAAACTAAT CATAGCAGAA GTCAAGGCTT TGTTGTTTGG ATCAGAAGAA GAAGTAGCTG CATCATCATC ATCACCAGCA TCCAGAGCTC CCATTGATGT CCTCCTTTGA GTTTTTTTTT AAAGTTGGTT CCTTTTTCCC AGTTGTCTTA AATTTCTAAA GTTTGAATGA GAATAA 
Length1686
Protein Sequence
Protein Residue
Map Locationscaffold_7: 6740547.. 6742520
Download Sequence
A.thaliana
AGI-codeAT4G25220.1
Descriptionroot hair specific 15
TAIR curator summary
Alias[AtG3Pp2][G3Pp2][RHS15][glycerol-3-phosphate permease 2][root hair specific 15]
Gene coexpression
MR
MR Locus Description
14.8324 Ahg481664 transposable element gene
16.9706 Ahg470876 Cation/hydrogen exchanger family protein
19.0788 Ahg494865 Pectin lyase-like superfamily protein
23.6643 Ahg325356 Pectin lyase-like superfamily protein
32.7109 Ahg907632
34.4674 Ahg358371 Pectin lyase-like superfamily protein
35.7211 Ahg316947 Pectin lyase-like superfamily protein
43.7493 Ahg477401 Pectate lyase family protein
45.5631 Ahg913449
46.2493 Ahg496290 cytochrome P450, family 89, subfamily A, polypeptide 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression