| Annotation |
|---|
| Description | jgi|Araly1|492866|fgenesh2_kg.7__2299__AT4G20050.1 |
| Sequence |
CATTCTCTAT ATGTACATGT TCTTCTGAGT TTTTTTCCCA AATTAAAATT GTTTGTCTTT TCTACACCTG ATTTATTTGA TTTGCAATAT CCATCCTAAT TAATAGAATT TTTTTTTTAT TAATTAACTT TTATTTTGGC TCTGTTTTAC ATTCACAGGC CTCAAATACA ACCCCATCGG AATCCCTAAA CAATAGAGAA GCTCAAAATC AAGATCAATT AGAGAGGAGG AAACCATGGA GCTAAGGAAA ACTCAAGTGG CCATGCCGGT TTTCTTGGCG ATAATGAGTC TAATGGTGAG TCAAGTGGTC TTCGCCGAGA AATATTCAGG TTCAATGTCC CCTCATGACA GGAAATTGGC AGAAATGCAA GCTCTTAAAG CTTCATTGGT TCGCCGAAAT CTACCGGCTT TGGTATCTCC TCCTCCTACC CCTCCTCAGG CAGTACCCGG TCCGCGCGTG TACCAAGTGA TATCATATGG TGCCGATCCC ACAGGGAAAT TGGATAGCAC GGATGCAATA TTAAAAGCTA TGGAAGACGC ATTTGATGGT CCAAATCATG GAGTTTTGAT GCAAGGTATA AATGATCTCG GAGGAGCAAG AATCGATCTT CAAGGTGGAA GCTACTTAAT CAGCCGTCCT CTACGATTTC CCTCAGCCGG CGTCGGAAAT CTTCTCATAA GCGGAGGTAC ATTAAGAGCA TCAAATGATT TTCCGGTCGA TAGGTACTTA ATCGAACTCA AAGACGAAAA GTCAAAATTA CAATACATCT TCGAATACAT AACTCTCAGA GATCTTCTCA TCGACTGTAA CTACCGCGGC GGAGCAATCG CCGTCATCAA TTCTCTCCGG ACAAGCATTG ACAACTGTTA CATCACACGA TTTGGAGACA CGAACGGGAT TCTTGTCAAA AGCGGACACG AGACTTATAT CCGAAACTCG TTTCTTGGTC AACACATAAC CGCCGGTGGA GACAGAGGAG AAAGAAACTT TTCCGGCACC GCCGTGAATT TGATGGGAAA CGATAACGCC GTTACTGACA CCGTTATATT CTCCGCTAGG GTCGGAGTAA TGATATCGGG ACAAGCAAAC TTATTATCAG GTGTGCATTG TTATAACAAA GCAACCGGTT TTGGAGGAAC CGGAATTTAT TTGAGATTAC CCGGTTTAAC TCAGAACCGG ATTGTGAATT CGTATTTGGA TTATACCGGT ATCGTCGCGG AAGATCCGGT TCAGCTACAG ATTTCTGGGA CATTTTTTTT GGGAGATGCG TTTATTTTGT TGAAATCGAT AGCCGGAGTG GTTCGTGGGG TTAATATTGT TGACAATATG TTTTCCGGGT CGGGTCATGG GATCCAGATT GTGCAATTGG ATCAGAAGAA CACGGCGTTT GAAGACGTGG ACCAGGTGGT TGTTGACCGG AACAGTGTGA ACGGAATGGG AGAGAGATCG ACGGTGGCTA GAGGATCGGT AGATGGAAAC GGGACATCTT GGACCGTTGA TTTTAACCCG GTTTTGTTGT TCCCGGATTT AATCAAGCAC GTGCAGTACA CACTCGTGGC GCGTGAAGCT GGTGCGTTTC CTCTACACGC GGTAAGGAAC GTTTCTGGTA ATCGAGTGGT CGTTGAGACA AACGCTCCTG TTACTGCAAC AGTTTATGTA ACAGTGAATC AAGGAGTTTA ATGTCGTGTT TTTGCCGTAA TAATGGTTTA ATAATTTTAT AAAATGATTT ATACTTGGTG GTTTTTTAAT TGTAATTTTT CCTGTAAGGA GGAAATTTAT TTTTATACTG CTAATAAATG ATAAAAACTC G |
| Length | 1811 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 9163472.. 9167161 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G20050.1 |
| Description | Pectin lyase-like superfamily protein |
| TAIR curator summary | Encodes a polygalacturonase that plays a direct role in degrading the pollen mother cell wall during microspore development. |
| Alias | [QRT3][QUARTET 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 30.4138 |
Ahg470353 | Zinc finger C-x8-C-x5-C-x3-H type family protein |
| 51.5364 |
Ahg924765 | PA-domain containing subtilase family protein |
| 53.619 |
Ahg481932 | laccase 3 |
| 54.3967 |
Ahg318409 | pleiotropic drug resistance 1 |
| 58.1464 |
Ahg903696 | Pectin lyase-like superfamily protein |
| 61.4817 |
Ahg483936 | Plant invertase/pectin methylesterase inhibitor superfamily |
| 63.7495 |
Ahg930652 | Glycosyl hydrolase superfamily protein |
| 64.2495 |
Ahg934840 | laccase 5 |
| 69.9714 |
Ahg321537 | Peroxidase superfamily protein |
| 74.7462 |
Ahg915751 | Uncharacterised protein family (UPF0497) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|