Detail



ID : Ahg493995

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493995|fgenesh2_kg.7__3428__AT5G39900.1
Sequence
GTATTAGCGC AGAGATGAAT TTCCTCTTAA CTTCTTCGTG TAGTTGAGCT CCAATCTCCT ACTATTACGC AAAACCCCCA AATGGGTTCT ATGTACAGAG CATCTAAAAC CCTAAAATCA TCAAGACAAG CATTTTCAAT CTTGTTCAAT TCACTCAAAT CCAATCGACA AACTCCGACA TGTATCGGAT TGTACCAAGC TTACGGTTTC AGCTCTGATT CTAGACAAAG CTCCAAAGAA CCCACCATTG ATTTGACCAA GTTTCCTTCA GAAAAGATTC GAAATTTCTC CATCATTGCT CATATTGATC ATGGGAAATC TACTTTGGCT GATCGTCTCA TGGAACTTAC TGGCACAATC AAGAAAGGTC ATGGTCAGCC TCAGTATCTC GACAAATTGC AGGTAGAGAG GGAGAGAGGA ATCACTGTGA AAGCTCAGAC GGCGACAATG TTTTATGAAA ACAAAGTAGA AGATCAAGAA GCGAGTGGTT ATCTTTTGAA CTTGATTGAT ACACCGGGTC ATGTTGACTT TAGTTATGAG GTTTCTAGAT CTTTATCAGC TTGTCAAGGT GCTCTCTTAG TTGTTGATGC GGCTCAAGGT GTTCAAGCGC AAACAGTGGC TAATTTCTAC TTAGCTTTTG AAGCTAACCT TACTATTGTA CCTGTGATTA ACAAGATTGA TCAACCAACT GCTGATCCTG AGCGTGTTAA AGCTCAATTG AAATCGATGT TTGATCTTAA TACAGATGAT GTGCTTCTTG TGTCTGCTAA AACCGGTTTG GGTCTCGAGC ATGTTCTTCC TGCGGTTATA GAACGGATAC CTCCACCTCC TGGGATTAGT GATTCGCCTC TACGGATGCT TTTGTTTGAT TCTTTTTTTA ATGAGTACAA AGGTGTTATT TGCTATGTTT CTGTTGTTGA TGGAATGTTG AGTAAAGGGG ATAAGGTTTC GTTTGCTGCG TCGGGCCAGT CTTATGAAGT ATTAGATGTT GGGATTATGC ATCCTGAGCT TACTTCGACA GGAATGCTTC TCACAGGACA AGTTGGTTAT ATAGTTACCG GCATGCGAAC CACGAAAGAG GCACGTATTG GAGACACAAT CTACAGAACT AAAACTACTG TTGAGACTCT TCCAGGTTTC AAGCCGGTGA GACATATGGT GTTCTCAGGC GTTTATCCTG CTGATGGATC TGATTTTGAA GCACTTAGTC ATGCCATAGA GAAACTGACA TGCAACGATG CAAGTGTATC AGTGGCTAAG GAAACAAGTA CAGCTCTTGG AATGGGATTC AGATGTGGTT TCCTCGGTTT GCTTCACATG GATGTATTTC ATCAACGGCT TGAACAAGAA TACGGTACAC AAGTAATCTC CACAATCCCT ACTGTTCCTT ACACATTTGA ATACTCAGAT GGAAGCAAGC TACAAGTGCA GAATCCAGCT GCCTTACCAT CAAACCCCAA ATACCGAGTC ACAGCTTCTT GGGAGCCAAC AGTAATCGCC ACAATCATCC TTCCAAGTGA GTATGTAGGA GCTGTTATCA ACCTCTGCTC TGATCGAAGA GGTCAGCAAC TAGAATACAC ATTTATAGAT GCACAACGGG TTTTGTTGAA ATACCAGTTA CCATTGAGGG AAATTGTTGT AGATTTCTAC GATGAATTAA AAAGCATAAC ATCAGGGTAT GCTTCTTTCG ACTACGAGGA TGCAGAGTAC CAGGCATCAG ATCTGGTGAA GCTCGATATC CTCTTGAACG GGCAAGCAGT TGATGCGTTA GCCACTATAG TTCACAAGCA GAAAGCATAC CGTGTGGGTA AAGAACTGGT TGAGAAGCTT AAGAACTACA TAGAGAGGCA AATGTTTGAA GTAATGATAC AAGCTGCTAT TGGTTCAAAG ATCATTGCAA GAGACACAAT CTCGGCGATG AGAAAGAATG TTCTTGCAAA ATGTTATGGA GGAGACATAA CTCGGAAGAA GAAGCTTCTA GAGAAACAGA AAGAAGGGAA GAAACGGATG AAACGAGTTG GTTCTGTTGA TATTCCACAT GAAGCTTTTC AACAAATACT CAAAGTCTCT TAGAAGACAA GCCAAGTAGT TTATGAAATG AAAGTTTTTG TTTCTTTGTT GGATTACTGT TTGTAAAATT GTCGAGCTAC AAGTTCTGAG GTTCTCACGA TTTA 
Length2174
Protein Sequence
Protein Residue
Map Locationscaffold_7: 21435666.. 21438121
Download Sequence
A.thaliana
AGI-codeAT5G39900.1
DescriptionSmall GTP-binding protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
13.4164 Ahg349113
21.3776 Ahg906059 Transducin/WD40 repeat-like superfamily protein
28.0357 Ahg488299 polyribonucleotide nucleotidyltransferase, putative
39.9875 Ahg493181 Protein kinase superfamily protein
43.3128 Ahg486580 Putative endonuclease or glycosyl hydrolase
49.7996 Ahg911486 Pentatricopeptide repeat (PPR) superfamily protein
58.8218 Ahg471563 O-fucosyltransferase family protein
66.2118 Ahg948460 decapping 5-like
68.542 Ahg920735 5'-3' exonuclease family protein
69.029 Ahg482053 homolog of yeast CDT1 A
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression