Detail



ID : Ahg928711

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|928711|scaffold_301168.1
Sequence
GTCAGGTCTA GAGGTGAAAA AAATGGCAAC TTCGCGTTTA CAGTTGGAAG GAGATGACTC TGTTCATCTA CACATTACTC ATGCCAACCT TAAAAGCTTC TCTGCGGATG TTCGTTTCTC TCCACAAATG AGTGTAGAAG CTGTGAAAGA AAAGCTATGG AAGAAATGTG GTACATCTGT TAATTCCATG GCTTTAGAGC TCTATGATGA CTCTGGCTCA AAGGTTGCAG TTCTCAGTGA TAATTCAAGA CCTCTCGGTT TCTTCTCCCC TTTTGATGGG TTTCGCTTGC ACATCATAGA TCTTGACCCG TCGTCAGTCA CAACTGGAGG CTGGCTTGAA GATACATCAC TGGTTGAGAA GTATAACATC TCAGAGGAGG ATTATGCTAA ACGAACTGAC AGTTTTAGGA AATTCAAAGA AAAAAGAGTG TCTCAAATTC CGGCTGCTGC TGAGGCTAAG ACGAAGGAGA ACTACATGGA AGATCTCTGT GCAAATATCA AGGTGGGAGA TAGATGCCAA GTTGAGCCTG GGGAGAAAAG AGGAATGGTC AAATATGTTG GACGAGCAGA GTCGTTGGGT CCTGGCTATT GGGTTGGAAT TCAGTATGAT GAACCCCTTG GAAAACATGA TGGCATGGTG AAAGGAACAA GATTCTTTGA GTGCCCTCCG CTTCAAGGTG GTATGGTCAG GCCTGACAAA GTAAAGGTTG GTGATTATCC GGAAAGAGAC CCTTTCGAGG AAGATGAAAT ATAAGATTTT CACGGAAGCA TCAA 
Length774
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3825268.. 3827422
Download Sequence
A.thaliana
AGI-codeAT3G10220.1
Descriptiontubulin folding cofactor B
TAIR curator summaryEncodes a tubulin-binding cofactor. Homozygous mutant plants are embryo lethal. Heterozygous mutant plants showed increased ploidy and higher numbers of spindles and phragmoplasts, suggesting a role in cell division.
Alias[EMB2804][EMBRYO DEFECTIVE 2804]
Gene coexpression
MR
MR Locus Description
7.93725 Ahg944847 selenium binding
9 Ahg495905 Cytochrome c oxidase, subunit Vib family protein
14.1774 Ahg938177
16.3095 Ahg495739 TCP-1/cpn60 chaperonin family protein
16.7332 Ahg949330 Small nuclear ribonucleoprotein family protein
19.2614 Ahg312091 DNA polymerase lambda (POLL)
23.6854 Ahg477906 peroxiredoxin IIF
24.1868 Ahg947286 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein
25.9037 Ahg494638 Glycosyl hydrolase family 47 protein
26.6083 Ahg474570 DEA(D/H)-box RNA helicase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression