Detail



ID : Ahg497461

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|497461|fgenesh2_kg.493__1__AT5G56410.1
Sequence
ATGGACAAGA TCACTGGATT TTCTGATGAT GAATTGCTCG TAAAGATCTT ATCATTTCTT TCAACAAAAG CTGCTGTTAG AACAAGTATT TTGTCGAAGC AGTGGAAGTT TCTTTGGAGG CGGATACCAA AACTTGAGTT TCACGATGAC ATTAAAAACT ATATACTCTC CATGAGGGGT GAGAGTAGAA CCGATTCTTT ACTGTTAGAA GGAAGCCAGA GGATGTGGCG TTTTATTGAC ATGAATCTGC CATTACATTG CTCTCCCGTA ATAGAGAGCT TGAGTCTTAC GTTATACAAT GAACTATTTC AACCTGAAGA TATTATATTG TGGGTTGAAA TTGCAGTTTC TCGTTGTGCT CAAGAGCTAA GCGTTAGCTA TTCTCCTTAC AAGGGAAAAC GTGATGCATT ACTGCCGACT AGCTTGTATA CTTGCAAATC ACTCGTGACA TTGAAACTAA GAGACAACAT TCTCGTGGAT GTTCCTCATG TTTTTTGCCT CCCCTCCTTG AAAACTTTGC ACCTTGTACG TATGACATAC GCAGATGAAG AATCTCTTCA ACGGCTTTTG TCTAATTGCT TTGTTTTGGA AGATCTGGTT GTGGAACGAC GTGTAGGTGA CAATGTGAGA AATGTTTCTG TTATCATCCC ATCATTGCTT AGTTTATCTT TTGAGATTTT GGGTCAATGT TCTTCGGAAG GGTATGTGAT ACATACTCCT TCTTTGAAGA ATTTCAAAGC TAAAGATTTT GGTAAGTGTT CCACATGTTT GATATTGAAT ATGCCTAAGC TGGAGGAGGC ATATATCGCC ACTGCTGGTC GCAATATCAA GAAGCTTCTT GAATCTTTCA CATATGTCAA GCGTCTTTCA TTGTTCATAC TAAACAACAA TGCAGAGGCT TTCACTGCTG TATATGGTGG TGACGATGTT GTCTTTAATC AGCTTGAGAA TCTGAAGTTT ATCATCCGTA GCGCATATTG GTCCAAGTTA CTATACTGGT TGCTCATAGC TTCTCCCAAA CTTCGAAACT TGGAGTTCAA TGAACCAATT TCACGTGGAT GGTATAATAC ACTGGTTTTC TGGGAGCAAC TGATACTTGT GTTCCTCAAT TGGTTAGGTA ACCATGATTC CATAGAAGGG AAAGCTCTGG CGACATATAT TTTGAGAGAG TCTTGCCAGT TAAAGACTGC AACAATTTCG ATCGGACAAG GACAAAAGAA GCTTGAGATG GAGAGGGAGT CTGCAATCAA CATCTGGATG TACAGATATG CGACTAATAA AGGTCGAAGC AACGAGTCCA GCGACTTAAC GGTTCTCCTA AACTCGCGAA TCCCCAATCT CTACGTCAAT GCAAGCTTAT TCGTAGGCTC AATCATGAGT CTAAAAAGAC CCTTATGGTG CAATATGGAC AAGATCTGTG GGGTTTCCGA AGATGAATTG CTAGTAAAAA TTCTATCGTT TCTTCCAACG AAAGTTGCTG TAAGCACAAG TGTTTTGTCT AAGCAATGGA AGTATCTTTG GAAGCGGGTG CTAAAACTTG AGTACGATGA CACCGAGTGC AAAACTAAAT CGTCTAAATC ACGTAAGAGG TTCCGGCGTT TT 
Length1602
Protein Sequence
Protein Residue
Map Locationscaffold_493: 929.. 4031
Download Sequence
A.thaliana
AGI-codeAT5G56410.1
DescriptionProtein with RNI-like/FBD-like domains
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.74597 Ahg925248 F-box and associated interaction domains-containing protein
9.59166 Ahg911037
17.3494 Ahg938540 Pre-mRNA-splicing factor 3
19.105 Ahg358371 Pectin lyase-like superfamily protein
26.1151 Ahg931789
37.9473 Ahg935288
45.2217 Ahg318329 Regulator of Vps4 activity in the MVB pathway protein
48.7442 Ahg918430
49.295 Ahg334132 Aluminium activated malate transporter family protein
52.6023 Ahg474384 RHOMBOID-like protein 5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression