Detail



ID : Ahg887449

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|887449|Al_scaffold_0096_3
Sequence
ATGGCTTTCA ACCTAAATGG TTTCAATTTC AACCAATCAG TAGTTGATAG TCAAGGACGT GTTATTAATA CTTGGGCTGA TATTATTAAC CGTGCTAACC TTGGTATGGA AGTTATGCAT GAACGTAATG CTCACAACTT CCCTCTAGAC CTAGCTGCTG TTGAGGCTCC ATCTAAGAGG GAACACTGTA ACAACAACCA GATCGGAAAC CCTAAAGAGG AATTAGGTCC TCTCTCCACT TATATATATA TGCCTTTAGA CCATCATAAA GGTATCCTTA ACAGAAACAC AACACATAAT AGTATTGTTC ATAGGCAAGG GGGAGAGAAA CCTAATTCTC CTAAACTGAA AGTTCAGGAC TTCAGGAAAC CGTTCATCAA GACAATCTCG GCTACAATGG TTGGAGGTAC TCCGCTAACC CTCCATCATA GTTCTGTCAT GTAA 
Length444
Protein Sequence
Protein Residue
Map Locationscaffold_96: 10187.. 10841
Download Sequence
A.thaliana
AGI-codeATCG00020.1
Descriptionphotosystem II reaction center protein A
TAIR curator summaryEncodes chlorophyll binding protein D1, a part of the photosystem II reaction center core
Alias[PSBA][photosystem II reaction center protein A]
Gene coexpression
MR
MR Locus Description
4.3589 Ahg925497 photosystem II reaction center protein A
7.68115 Virus1471
17.4929 Virus1901
26.7208 Ahg315523 photosystem II reaction center protein D
27.6586 Ahg931003 Photosystem I, PsaA/PsaB protein
28.2489 Virus1464
28.931 Ahg475563 ribulose-bisphosphate carboxylases
29.3258 Ahg907863 photosynthetic electron transfer B
29.6648 Ahg907865 photosystem II reaction center protein B
31.3209 Ahg925489 ATP synthase subunit C family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression