Detail



ID : Ahg925497

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|925497|scaffold_201058.1
Sequence
TGTGCGCTTG GGAGTCCCTG ATGATTAAAT AAACCAAGGA TTTTACCATG ACTGCAATTT TAGAGAGACG CGAAAGCGAA AGCCTATGGG GTCGCTTCTG TAACTGGATA ACCAGCACTG AAAACCGTCT TTACATTGGA TGGTTTGGTG TTTTGATGAT CCCTACCTTA TTGACCGCAA CTTCCGTTTT TATTATCGCA TTCATTGCTG CTCCTCCAGT AGATATTGAT GGTATTCGTG AACCTGTTTC TGGATCTCTT CTTTACGGAA ACAATATTAT TTCCGGTGCC ATTATTCCTA CTTCTGCAGC TATTGGTTTG CATTTTTACC CGATCTGGAA GNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 
Length400
Protein Sequence
Protein Residue
Map Locationscaffold_2: 8260578.. 8260918
Download Sequence
A.thaliana
AGI-codeATCG00020.1
Descriptionphotosystem II reaction center protein A
TAIR curator summaryEncodes chlorophyll binding protein D1, a part of the photosystem II reaction center core
Alias[PSBA][photosystem II reaction center protein A]
Gene coexpression
MR
MR Locus Description
2.82843 Virus1901
4.3589 Ahg887449 photosystem II reaction center protein A
5 Ahg907865 photosystem II reaction center protein B
8.3666 Ahg475560 photosynthetic electron transfer A
9 Ahg925489 ATP synthase subunit C family protein
10.9545 Ahg925462 photosystem II reaction center protein J
13.0384 Ahg475584 ATP synthase subunit alpha
15.6844 Virus1897
16.2481 Ahg925507 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein
16.2481 Ahg925541 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression