Detail



ID : Ahg887495

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|887495|Al_scaffold_0065_3
Sequence
ATGGCTTCTT CTTCCTCGGT TGTGAAACCC ACCCCAACGG GGCCTCAAGT GTTCATATGC TTCCGGGGAG CAGATGTCCG ATCACACTTC ATAAGCCATC TTGACCCTGC CTTGAGAGAA GCGAATATAA ACGTCTTCAT AGATGATGAC GAGTTTTTGG GCACAGATTT GGTTAACCTT TTGAAGAGGA TAGAAGAGTC AGAGATCGCG CTAGTGATCT TTTCGGAGGA TTTCACAAGT TCGTATAGGT GCTTGGATGA GCTGGCCAAG ATCAAGGAAT GCAAGGATCA AGGCCGTCTC ATAGTGATTC CCATCTTCTA CAAAGTTAAA CCTTCCGTTG TGAAATATCT TAAAGGAAAT TTTGGCGATA ATTTCAGGGA ACTAGAACGC AATAATCTAC ACATGCAACA AAGAACTCAG AAATGGAAGA AAGCTTTAGT GTCTATCCCG GAATCAAAAG GGATGCCAAG GGCAGAACAA AGTGAGAAGA CCGATAAAGA CTTCATAACC TCAATGGTCA TCAAGATTCA AGAATTACTG GATTATATGG CTGCCAGAAG AAACAAAGAA ATAGAAGCGA ATCGTCAAGG AGTTTCCATC GTCCCTGCAA GGAAACCAAA AGCAGAAGCG AATCCTCAAG GAGGTTCCGT GGTCCCTGCT GCAAGGGAGC AAGAAAGAGA AGCGAGTCAT CAAGGAGGTT CCGTGGTCCC GTCCATGGTC CTTGCAAGGG ATTTAGTAAT CACTCATTTT GATAAACCTC AAAGATGGAC TTGGAGTACT ATCAACGAGG CACCAAACTC TGCGGAAATT GAGATTGCGA CGTCGAATAA ACTTTACTGG CTTAAAATAG TGGGAACAAT AACTACGGAG AATCTAACAC CAGGAACTAA GTACGAGGCT GTATTCGTAG TGAAATTAGA AATTAATGCT AGTGGATGGG ATATACCAGT GACTCTAAAG CTGAAGGTGG TACAACACGA TGGGGACGAT GATCGGGTGG ATCGAACAGA GAACTTGAAC GATTACATAG GCCAGAACTG GGTGGATATT TTGGCCGGAG TTTTCGTGGT TCCGCCAAAA ACCACTCCCG CAACGATCAT TTGCACCATG TATCAGTACG CGGACGAGTA TAAGAAAAAG GGACTCGTCG TCAAAGGTCT TGCAATACGT CCCACGAACT AA 
Length1182
Protein Sequence
Protein Residue
Map Locationscaffold_65: 32417.. 34165
Download Sequence
A.thaliana
AGI-codeAT5G45080.1
Descriptionphloem protein 2-A6
TAIR curator summary
Alias[AtPP2-A6][PP2-A6][phloem protein 2-A6]
Gene coexpression
MR
MR Locus Description
2 Virus3873
2.44949 Ahg947981 transcriptional factor B3 family protein
3.16228 Ahg929884 MUTS-homologue 5
4.47214 Ahg922471 Protein of unknown function (DUF630 and DUF632)
5.2915 Ahg943111 Tetratricopeptide repeat (TPR)-like superfamily protein
7.74597 Ahg331561 Defensin-like (DEFL) family protein
10 Ahg949448
10 Ahg952062
10.8167 Ahg930646
12 Ahg912575 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression