Detail



ID : Ahg890933

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|890933|Al_scaffold_0007_2919
Sequence
ATGGAGAGTG CAACGAGTGC TAACCAACTA CAACTGATCT CATCTTTCCT CGACATCACC GTTGGCCAAA GTGTAGAAAT CGCTCTTCAG TTCCTTAAGG CAACAAACTG GCACCTTGAA GATGCCATCA ACCTCTTTCT CATCGCTAGG AGAAACCCTA ATCCAGAACA AGTCCCTCTT CCTTTACCTT CGATGATGGA TACTCTCTAC GACTCTTCCA TGCGTCACAA CACTTCGGTC GCCGTATCTC CTGAAGATAT CTGGGACTCG ACATCTGAGG AGTCCGAATC CTATTCAAGG TTGTCTTCCT TGTACCGTCC TCCTCCAAGT CTGTTTTTCC ATGGTTCGTT TGAAGATGCG AAAGCAACTT CCTCTAGAGA GGATCTATGG TTGCTTGTCT ATGATCATAC CAACGAAGGT CAGAAGATAT CTACTTTTTA CAAGATCGAC TTTGCTCCTC CTGTGGTTCT CCTCATCGAT CCCGTCACTG GCCAGAAGAT GCGTATGTGG AGCGGTATGA TTGAACCTCA GGGTTTTCTT GAGGATTTGA TGAAGTACAT GGATGCTGGT CCTCACGAAC ATGTTGCTTC TCTAAGCAAC AAACGTATCA AAACAGAGAA GATTTCCTTT CCAAGCAACA ACGCTGATGA TCAAGTAGAC ATGGCGACTT TCTGGGGTGA TGATATTGAA GAAGAAAAGA CTGTAGCCAA AGATGAAAAG GAGGAGAATC TCGTTGTGGC TCCTTCTTGG GGGCAAGAAT TTGAAGACAT AAAGACTTTA TCCGACCATG AGGAGGAAAC TTGTTTGTCA AGCGACCTGT TTGAGTTCCC GGTTTTGACA GAAGAGCCAA AAGAAGACTG TGATAGAAGC ATTGTGTGCA GTTTGTGCGT TCGATTTCCA GATGGAAGAA GAAAGCAGAG GAAGTTTCTC AAGAGCGAAC CAATACAACT TCTCTGGTCT TTCTGTTATT CTCACATGGA GGAATCCGAG AAGAAGGCGT TCAGGCTTGT GCAGGCGATT CCTGGTGCTT CCAAGACTCT GGATTATGGA GCTAATGTCA CGTTTGATCA CTCTGGGCTT GCTAATTCGA TGATTTCGGA CGCAGACTCT ACGACATCAG GAACGTCCGA TGATGCAGAC TCTGAAGAAT CAGAGTCGAG ATTGTCTTCC TCGTTTCCTC CTCCTTTGTA TATACTTCAA GAGGTGAATC TCCAGTCCAG GACGGAGTTA GCTTCTCATA CACTTAATAG AGATGTATGG GCGAAGGACG CGGTTTCGCG AAACATTGAG TCTAGCTGCA TCGTATGGCA GGTCTATGAT GATACAAACG AAGGTCAGAA AGTCTCTAGC TTCTACAAGA TCGAATCTGC TCCTCCTGTG GTTTTTGTAA TCAATCCCAT CACTGGCCAG AAGATGCGTA TGTGGAGTGG CGTGATTGAA CCTGACAGTT TTGTCGAGGA TTTGATGATG TTTAGGGACG CTGCTCGTCA CGAAAACATT GCTTCTCTGA CAAGGAACAG GCGCACGGAA ACTACAGAGA CTTGTTCGTT AAGCAACAAC ATCTATTATG AAACCCCTCC TCCTTCCTGG GGTGAAGAGT TTGAAAAGGA GGATACTTGT TCGTCAAGAA ACAATAACAA TCAAGTCGTG GCTCCTTGGG AGCAAGAATT TGAAGACCAA GACAGGGGGG AGACTTGGTC GTCACGCAGC GACACTGATG ACTTTGTGCC TCCTTCTATA GCGGACGAAT ATGAAGACTC TGATGAAGTA AAGGAGGAGG AGGAGACTTG TTTAGTGTTC CCGGTTTTGG CAGAAGAGCC AAATGGAGAC TGTGATCGAA GTTTTGTGTG TAGTCTCTGC GTTCGATTTC CAGATGGGAG AAGAAAACAG AGGAGATTTC TCAAGAGCGA ACGGATTCAG CTTCTTTGGT CTTTCTGTTA TTCCCACATG AATGAATCTG AGAAAAGGTC GTTCAAGCTG GTGCAGGCGA TTCCCGGTGC TTCCAAGACT CTAGATTATG AAGCTGACAC CACGTTTGAC CAATCCGGGC TCGCTAATTC GATGATCTCG GTTACTTGGG AGTGA 
Length2085
Protein Sequence
Protein Residue
Map Locationscaffold_7: 13314340.. 13340346
Download Sequence
A.thaliana
AGI-codeAT4G14250.1
Descriptionstructural constituent of ribosome
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
15.0333 Ahg489899 Subtilase family protein
42.638 Ahg358371 Pectin lyase-like superfamily protein
42.9884 Ahg312453 Peroxidase superfamily protein
46.9894 Ahg337131 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
55.4256 Ahg936672 Protein of unknown function (DUF1216)
58.7878 Ahg888872 Pectin lyase-like superfamily protein
63.9687 Ahg942130 Leucine-rich repeat (LRR) family protein
66.0303 Ahg947385 Heat shock protein 70 (Hsp 70) family protein
68.775 Ahg926802
73.6885 Ahg478720 SKU5 similar 11
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression