Detail



ID : Ahg892438

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|892438|Al_scaffold_0006_434
Sequence
ATGAATTCGA TGGTCTCCAC TGTCCGTGGA ATATTCACGC TTTCAAAATC TGATACTTCA AATTCGCCAT CTGATGAAGC CAAGAGTGAC TTGAAGGTGT TATCAGTAGC TTGGAACCAG GAATGGAGTG GTTTCATAGT TGGAACAAAT CGCGGGTTCA ATGTATATAG CTGCAAACCA ATGATCAAGA AAAGCATCAG CCGTGAACCG CACGAATCAG GCTTCAAAGT CGCTGAGATG CTCTTCCTTT CTAACCTATT TGCTCTTGTT GGAAATGGTT ATAACAATTC CGAGTATCCT CCTAACAAAG TCTTCGTTTG GGACGATCAC AGATTTTGCT GCCTCCGTGA GCTCGCTTTT AAATCAGAAG TTATCGCCGT GAAACTAACG AGAGAACACA TTGTGGTTGT CCTGAAACAA AACATCTATG TCTACACTTT CAACAACCTT AAGGTTTACC GTCTGATCGA AACTCTCATG AATCCGAAAG GACTGTGTTG CGTCACTCAC GTTGAGTCGA AAGCAGTCTT GGCTTGTCCC GGGTTTCATC CGGGACAAGT TCAGGTCCAC AACTTGAGAC GGAATGTAAT CAAATTCATC AAAGCACATG ATTCTGCTAT TGCTTGCATG ACTTTTACTC TCGATGGAAG TCTCCTCGCA ACCGCTAGCA CGAAAGGAAC CCTGATCAGG ATTTTTAACG CAGTTGATGG TACTCTCTTA CAAGAGTTGC GGAGAGGAAT GGAAAGAGCA GAGATCTATA ACGTTGCAAT CTCTTCAAAT CGGAAATGGG TCGCTGCGTC AAGTGAAAAA GGGACTCTCC ATGTATTTCG TTTGAGACCT GACATTCTTA GTTTTAATCT GGCTTCTTCG TCGTCATTCA TGAAAGGGAT CTTACCGAAG TACTTGTACG AAAATGAACG GTCGTTTGCT CAGTTCTCGT TGCCAGCTTC CACCAAGTTC ATTGTAGGTT TTGGATCAGA GAACACTGTT CTTCTCCTAG GCATCGATGG AAGTTTCAGG AGGTGCAAAT TTGATCAAGC AGATGGAGGG CAGATGGTGG AATTGGAACA CAAATACTTC TTCTCCTTGC AAGAGACGGG CGACACAATG GGTTTGATGT GA 
Length1122
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1796026.. 1797394
Download Sequence
A.thaliana
AGI-codeAT5G05150.1
Descriptionautophagy-related gene 18E
TAIR curator summary
Alias[ATATG18E][ATG18E][G18E][ARABIDOPSIS THALIANA HOMOLOG OF YEAST AUTOPHAGY 18E][autophagy-related gene 18E]
Gene coexpression
MR
MR Locus Description
8 Ahg341444 RING/U-box superfamily protein
13.1909 Ahg909593 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
21.3542 Ahg945046
28.2843 Ahg891241
36.1801 Ahg930778
46.7226 Ahg900288
49.689 Ahg940677 6-&1-fructan exohydrolase
50.2593 Ahg927977 Kunitz family trypsin and protease inhibitor protein
63.0476 Ahg947028
64.4826 Ahg944023
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression