Detail



ID : Ahg937676

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|937676|scaffold_501867.1
Sequence
TCTCAGTGTT CTTCTTCACC ATCATGCTCT CTCGTTTATT CCTTAGACCT TCGAATCTCC GTTACGTAAC ACTAGTTACA TCGAAATCAA ATTCTCAGAT CTTCTCTTCG TTTATTCGTC CGCTTTCCAC TAACAGTACC GGCGGCGGCG GAAATGGTGA CGGGAATGGT CGTAATCGGA ATGATGTTCC GTGGAGTTTT ACTGGAGTAA ACGATGATAA GTCTGGTCCT TTCTCTTCCG ATGATTCTTG GGGTTCTTCT GGAGTTGCAG GATCTGGGTC TGTTGGTGGA GATGGGAAAT GGCCGGAGGA GCCTAAGAGA TGGAATATGA AAGAGGAAGA GGATAAGGTT GTGTTTGATA CTGGTGGTGA AGTCGGTCAA GGGATTGAGA CTGGTCGCGA GAGGAGAGGC AATGAATGGG AGGAGACTAA GCGATGGGAT ATGAAGAAGG GAGAGGAGAA AGTTGTGTTT GGTGCTGGAG AAGATGTGGT GGATGGGTTT GGAATTAGAG GAGAGGTGAA ATCTAATGAA TGGGATGTGT CAAAGCCGTG GAATTTGAAA GAAGAGGAGG AGGGAGTTGT GTTTGATACT GGTGGTGAAG TGCCGTTTAG CTTTGAGAAT AGCTTGGAAA TGGCGGAGGA AGAGCGTGTG AAGAAGGAGT TGATTGAGAA AGAGGAGAAG GAGCTTCTTG AGGTTATCAA GGGTCCTGAT CGAGCATTTG GAGACCTTAT TGCTAAGTCG GGTATAACAG ATGAAATGCT AGATAGTTTA ATAGCCTTGA AGGATTTCCA AGGGGTCGAA GGATTGCCTC CTCTGACTGA GATTGAAAAC CTGCGCCGTG AGAAAAGTTC AAAGAAGTCC TCAAGAGCTG AGATTGAACT CCAGATGCAA GAGGACATTG CCAAAGCACG GGTGAGACAG GTTGACGAAA CAGGTAGAGC CTATGGAACT GGAAGAAGAA AATGTAGCAT TGCCCGTGTT TGGATTCAAC CTGGGGAAGG AAAATTTCAA GTTAATGAAA AAGAATTTGA TGCCTATTTC CCTATGCTTG ATCATCGCGC TGCTCTTCTA CGCCCACTTG CTGAAACCAA AACCTTGGGT CGGTGGGATA TTAAGTGCAC TGTTAAAGGC GGTGGTACTA CAGGTCAAGT CGGAGCTATT CAATTGGGTA TCAGCAGGGC ACTGCAAAAC TGGGAACCAG ATATGCGGAC ATCACTTCGA GCTGCTGGTT TTTTGACAAG AGACTCTCGA GTTGTGGAAA GGAAGAAACC TGGAAAAGCC AAGGCTAGAA AGAGCTTCCA ATGGGTCAAA CGTTAAATCC GAAAACCCGT ACAATATCTT 
Length1340
Protein Sequence
Protein Residue
Map Locationscaffold_5: 13436418.. 13438491
Download Sequence
A.thaliana
AGI-codeAT3G49080.1
DescriptionRibosomal protein S5 domain 2-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.3666 Ahg893605 AAA-type ATPase family protein
11.6189 Ahg471469 ARM repeat superfamily protein
11.7473 Ahg353700 DNA topoisomerase, type IA, core
14.2127 Ahg329936 RNA binding
14.4914 Ahg492264 fibrillarin 2
15.1327 Ahg493122
16.7332 Ahg948747 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain
20.0499 Ahg476911 replication factor C subunit 3
20.8806 Ahg892758 Tetratricopeptide repeat (TPR)-like superfamily protein
21.4476 Ahg938279 Pentatricopeptide repeat (PPR) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression