Detail



ID : Ahg896903

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|896903|Al_scaffold_0005_869
Sequence
ATGAACCGAT CAATGACTTT TGTTGTGTTA CTGACGATTC TTGTCTCGGT GGCTAACCTT GGCTTGGCTC ATGTCGGTCT TACTAATATC GACCCTTCGT GGTATGACGC ACATGCGACG TTTTATGGCG ATATGAGCGG CGGAGAAACC ATGCAAGGAG CATGTGGTTA CGGGGATCTA TTCAAAGAAG GTTACGGCTT AGAGACGGCG GCGCTAAGCA CGGCTCTTTT CAACAATGGC CAAACTTGTG GTGCTTGTTT CGAGCTCATG TGTGTGAACT CTAAATGGTG CAAACCAAAC GCTGGTTCAA TCAAAATCAC AGCCACTAAT TTCTGCCCAC CAAATTATGA CGAACCGGTT CAATACCATT GGTGCAACCC TCCTAACAAG CACTTTGATC TATCGATGAA AATGTTCACT TCGATGGCTG AGTACAAAGG AGGGATAGTT CCGGTGAAGT TCAGGCGAGT GATGTGTCAT AAGAGAGGTG GTGTGAGGTT TGAGATTAAG GGCAATCCTT ATTTTATCAT GGTTTTGGTG TATAACGTTG GAGGCGCAGG AGATGTGAAT AACGTTGAAA TTAGAGGGCA TAAGAGTAAT TGGATCGTTA TGAAGAGGAA TTGGGGGCAA ATTTGGAATA CTGGTGTGGA TTTGGTTGGA CAAAGGCTCT CGTTTGTGGT TCGGACCAGT GATGGTAGGA GCATGACGTT CTTTAATGTT GCGCCTGCGA GTTGGGGGTT CGGTCAAACT TTTGAAGCAA AACTGAACTT TTAG 
Length774
Protein Sequence
Protein Residue
Map Locationscaffold_5: 5331083.. 5331984
Download Sequence
A.thaliana
AGI-codeAT3G29365.1
Description
TAIR curator summarymember of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)
Alias[ATEXP19][ATEXPA19][ATHEXP ALPHA 1.21P][EXP19][EXPA19][expansin A19][EXPANSIN 19]
Gene coexpression
MR
MR Locus Description
10.3923 Ahg897183 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
10.6771 Ahg949069 transposable element gene
13.5647 Ahg897355 RING/U-box protein with C6HC-type zinc finger
14 Ahg921385
21.7025 Ahg926802
26.9072 Ahg484455 AP2/B3-like transcriptional factor family protein
28.8097 Ahg923597 WIP domain protein 5
30 Ahg938233 plastocyanin-like domain-containing protein
35.5809 Ahg486551 F-box family protein
35.9444 Ahg929733 ROTUNDIFOLIA like 20
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression