Detail


ID : Ahg897670

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|897670|Al_scaffold_0005_1636
Sequence
ATGGAAAATA CGGCGAGCTT AGTGACGGGT CCCGACGGAC GAAAACGGCG AGTGAGCTAC TTCTTCGAAC CAGAGATTGG CCAACCAACG GATCCCTTTC CGAGCCATAT GGCGCACAAG CTCATCCTCA CATATGGCCT CGACCGCCAC ATGGAAATCA GCCGCCCATA TCTCGCCGGC GTTTTCGATT TCACACAATT CCACTCACCG GAGTATATCC AATTCCTCGC CTCCCTTACG CCGATGAATT TAAAGGATCC TTCCGTCTCG CTTAACAAAA GTCGCTTCTT CGACCTAGAT GTGAACCGGC ACACAAACAG TACTATCTTC AACGGCCTCT TCGATTATTG CCGCGCCTCT GCTGGTGGTT CTTTAAGCGC CGCCGTCAAA TTGAACCGTC GGGAAGCCGA TATTGCTATC AATTGGGCCG GTGGGATGCA CCGTGCCAAG CGTGATCGTG CTTCTGGCTT TAGCTTCGTC AATGACGTTG TGCTTGCGAT TGCCGAGTTG CTCAAGGTTT TCAAGCGAGT TCTCTACATA GATATTGGCT TCCGTCATGG GGATGCAGTG GAAGAAGCAT TTTACAATAC GGATAGAGTT ATGACTGTTT CTTTCCACAC ATATACGGAC ACACCTTTCC CAAGAGACGG AGACAGAAGG GAGTTGTATT CTCTAAAAGC ACCATTAAAG AATGGGCTCA AAGATAAAAG TCTTCGCAAC TTGTTCAGAC CTGTTATCAA CAAGGCAATG CAAGTTTATC AGCCAGAAGT TGTTGTTCTT CAGTGTGGTG CTGATTCATT AGCTGGTGAT TTTACATTCA ACTTGAAAGT CAAGGGTCAC GGTGCTTGTC TCGAGTACAT AAGATCTTTT AATGTTCCTC TCATGGTCTT GGGTGGTGGT GGTTCTACTT TTCGACATGT TGCTCGTTGC TGGTGCTATG AGACAGCGAT TGCTGTTGGG GTTGGGGAAC AACTTGAAGA AGAACTCAAA GTCAATGAGT TTCATTATAA GCCAAACTTC CAGCCGGATT TTAACACAGC AAGAGATATT GAGATTATAA GGAATGGATT ACTAAGGCAA CTTTCACAGC TAATACACGT ACCAAGTGTA CAGTTTCAAG ACACTCCACC AATCAGTGAA GCTACAGAAC CGGCGGAAGT GGACATGGAG AAGAGACAAG TTATACAAAA TTTGAGGCGA TCCAAGCTAT GA
Length1212
Protein Sequence
Protein Residue
Map Locationscaffold_5: 13054932.. 13056830
Download Sequence
A.thaliana
AGI-codeAT5G35600.1
Descriptionhistone deacetylase7
TAIR curator summary
Alias[AtHDA7][HDA7][histone deacetylase7]
Gene coexpression
MR
MR Locus Description
20.8806 Ahg944327 zinc finger (C2H2 type) family protein
20.9045 Ahg351609 Protein of Unknown Function (DUF239)
22.7156 Ahg494446 proline-rich family protein
35.7911 Ahg917658 subtilase 4.13
39.37 Ahg947152
39.7492 Ahg907708
39.9124 Ahg930033 Integrase-type DNA-binding superfamily protein
47.7703 Ahg478708 Plant protein of unknown function (DUF868)
51.9038 Ahg338146 KNOX/ELK homeobox transcription factor
52.0769 Ahg484455 AP2/B3-like transcriptional factor family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression