Detail



ID : Ahg899891

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|899891|Al_scaffold_0004_541
Sequence
ATGTACAAAA AGCAACTAAG AACCCGCCAT AACAAAACTA TGATGTCGAA GAAGAAAGAA AGCATCGGAC GACAAAAAAT TCCAATGGTG AAAATAAAGA AAGAGAGCCA CCGGCAAGTC ACATTCTCGA AACGCAGAGC CGGTCTCTTC AAGAAAGCTA GTGAGCTCTG CACGTTGTGT GGTGCAGAGA TTGGGATCAT CGTGTTTTCT CCTGCAAAAA AGCCTTTCTC ATTCGGACAT CCGAGTGTCG AATCTGTATT GGATCGTTAC ATGTCTCGAA ACAATATGTC CTTAGTTCAG ACGCAGCAAC CGCAAGGAAG CCCTGCAGCG AGCTGCGAGC TGAATATGCA GTTAACGCAT ATTTTGAGCG AGGTAGAGGA AGAGAAGAAG AAAGGTCAAG CTATGGAAGA AATGAGAAAA GAGAGTGTGA GGCGGTCGAT GATCAATTGG TGGGAAAAGC CAGTAGAGGA GATGAATTTG GTTCAGTTAC AAGAAATGAA ATATGCATTG GAGGAGTTGA GGAAGACGGT TGTGACAAAT ATGGCATCGT TTAATGAGGC GAAAGACGAT GTGTTTGGTT TCTTGGACAA CAAAGTGACG GCTCCTCCTT ACATGAACAT GTCTTCTGGT CTCTCAAGTA TTTATTATGC CAACGGAAAT GGTTGTTTCT GA 
Length672
Protein Sequence
Protein Residue
Map Locationscaffold_4: 3252326.. 3252990
Download Sequence
A.thaliana
AGI-codeAT2G24840.1
DescriptionAGAMOUS-like 61
TAIR curator summaryEncodes a member of the Agamous-like family of transcription factors. Localized to the nucleus in the central cell and endosperm of the female gametophyte. Loss of function mutations show reduced female fertility. Fifty percent of ovules have defective central cells with abnormal morphology and patterns of gene expression. Upon fertilization 50% of seeds abort. Using yeast two hybrid assays AGL61 was shown to interact with AGL80, another MADS box gene with similar defects in ovule development. These data suggest that AGL61 and 80 together are required for proper differentiation of the central cell.
Alias[AGL61][DIA][AGAMOUS-like 61][DIANA]
Gene coexpression
MR
MR Locus Description
3.16228 Ahg939799 Putative membrane lipoprotein
5.56776 Ahg475240 AGAMOUS-like 55
10.8167 Ahg952573
13.8564 Ahg357456
15 Ahg951015
17.3205 Ahg897856
17.9722 Ahg907997 DegP protease 4
18.3303 Ahg936820 ralf-like 27
32.4962 Ahg927567 SWIB/MDM2 domain superfamily protein
35.9166 Ahg920704 beta-tonoplast intrinsic protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression