Detail



ID : Ahg907997

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|907997|Al_scaffold_0002_1078
Sequence
ATGTTGTTCC GGTTTCTTCA AACATTGGCT CGGTTCTGTA GCTTCTTGCT CATTTCGGTT ATGGGATCCC GTTTTTCTCC TTTGTTTCTT CTTGGTTACG TTAAATTGCA AGACGAAAAT CATCACAACA GCGAGTCAAC ACTTGCATCA GGGACTGACA CAAAACAACC GGATGCGGCA GAAAACGTGA CATCTTCTTC TATTGATTTT GCGGTAAATT CAGTGGTGAA GGTCTTCACT GTCTCTAGCG TGCCTAGCAT TTTGCAACCT TGGCAAAATT GGCAGCAGCA AGAATCCAGC GGCTCTGGAT TTGTAATCTC GGGAAAGAAG ATTCTTACGA ACGCTCATGT AGTTGCTGAT CACATATTTT TGCAAGTTAG AAAACATGGC TCACCTACAA ATTACAAAGC AGAAGTTCGA GCGGTTGGAC ATGAATGTGA TTTGGCCATT TTGGAGATCG ATAATGAAGA GTTTTGGGAG GATCTGATCC CTTTGGAACT CGGAGAGATA CCCTCTCTGG ATGAATCTGT TGCCGTTTTA GGCTACCCTC ATGGTGGTGA CAGCCTTTCC ATTACTAAAG GTTATGTTTC TAGAGTTGAA TATACACAAT ATGCTCACGG AGGCACTACA CTACTCGCTA TACAAACAGA TGCGGCTATA AACTCTGGAA ATAGTGGTGG TCCAGCAATC ATAGGAAATA AAACGGCAGG TGTAGCTTTT CAAAAATGTA CATCTTCAGA TAATATAGGA TACATAATCC CGACTCCAGT AATAACACAT TTTTTAACTG CTGTTGAAGA AAATGGACAA TATGGTGGTT TCTGCACGCT AGACCTTTCT TATCAACTTA TGGAGAATTC TCAACTCCGT AATCATTTTA AGATGGGTCC TGAAATGACA GGGATTCTTA TAAACGAAAT AAACCCGCTG TCCGATGCTT ACAAAAGGTT AAGAAAAGAT GACATCATTC TCGCAATTGA TGATGTTCTT ATAGGAAATG ATGCGAAAGT TGCTTTTCGG AACAAGGAAC GAATCAATTT CAATCATTTT GTTTCGATGA AGAAATTAAA TGAAACAGTC TTACTTAAAG TTTTGAGAGA GGGGAAAGAG CATGATTTTC ACATCAGTTT AAAACCCGTG CCACCGCTGG TTCCAGTGCA TCAGTATGAT AAGCTTCCAA GTTATTACAT ATTCGCAGGC TTTGTATTTG TACCACTCAC ACAGCCATAC ATTGACAGTA CTCTGATTTG CAATTGTGCA AATAAAAATA TGCCTGAAAA GGCTGGTGAA CAGCTTGTCA TAATTTCGCA GGTGTTAGCT GATGACATCA ATGCAGGATA CACTGATTTC AATGATTTAA AGGTAATAAA AGTGAATGGA GTTCAAGTGG AGAATCTAAA ACATCTATCT GAATTGGTAG AGAAATGCTG CACCGAGGAT TTAAGACTGG ACTTAGAAAA CGAGAAGGTT GTGGTCCTCA ACTATGAAAA TGCTAAAGAA GCTACTTCTT TGATCTTAAA ACTTCATAGA ATACCATCGG CCAACTCCAA AGACCTTCAA AGTGAAAAGG GCCCTTTAAT ATACTAG 
Length1587
Protein Sequence
Protein Residue
Map Locationscaffold_2: 9266273.. 9269007
Download Sequence
A.thaliana
AGI-codeAT1G65640.1
DescriptionDegP protease 4
TAIR curator summaryEncodes a putative DegP protease.
Alias[DEG4][DegP4][degradation of periplasmic proteins 4][DegP protease 4]
Gene coexpression
MR
MR Locus Description
16 Ahg312181 zinc finger (C2H2 type) family protein
17.9722 Ahg899891 AGAMOUS-like 61
24.5764 Ahg936167 Adenine nucleotide alpha hydrolases-like superfamily protein
24.5967 Ahg943604
29.2404 Ahg351064 Major facilitator superfamily protein
30.8545 Ahg922192 F-box and associated interaction domains-containing protein
34.9285 Ahg898848
53.3292 Ahg488703 NAC domain containing protein 88
53.591 Ahg486927 cation exchanger 4
53.6656 Ahg316679 Plant thionin family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression