Detail



ID : Ahg901090

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|901090|Al_scaffold_0004_1740
Sequence
ATGGGAAAGA GATTAAAGAA GGGTCAAAAG CCTCCATATC TGTGGTTGCC TCCAACGGTC TCTAAGAAGG TAACTAAGCA ATCTGAGCAC AGCGTGGAGG TAACTGAGGA GGTTGTGACA GTGCCGGAAA AAAGATCTTG TGTCCATTTT GATAAATTTG TTGATTTGGA TAAGCTGTTG AAAAAGATTA AATCCTCTCA ACAAATCAAG TGTGGAGAAT GCAAGGAAGG AGTGCACGTG AAGAGAGGAA GTAAAGCGAG TATTAGTAGC GGGATATACT GGTTTTCTTC TTCTGACCAG AAGTGTGCTA AAAAGGCTAT TTGGGTTTGT TTGGAATGTG GCTATTATGT TTGTGGAGAT GTTGGTTTAC CGACTGGGGC TCAGAGTCAT GTTATGCGGC ACTTCAGGTT GACGCGTCAC CGTTTGGTGA TTCAATGTGA AAATCCTCAG TTAAGATGGT GTTTCTCATG CCAATCACTT GTCCCTTTTG AAAAAGAAGA GAATGGTGAG AAGAAAGATT TGTTGCTGGA AGTCGTGAAA TTGATTAGAG AACGATCTCC AAACACGTTC TCCGCTTCAT TTGAAACTGA ATATTCATGT TCAGGAAGTG GTAATATCAC TGGTGGTAGT TTCACTGGTG GTATAGAAGC AAGAGATGGT TATGCTGTAA GAGGTTTAGT TAACCTTGGG AACACATGTT TCTTTAATTC TGTAATGCAG AGCCTTCTCT CTTTGGATCA ATTACGTGAG CACTTCTTGA AAGATGATCT ATCTGTTAGC GGGCCTCTCG TTTCTTCCCT GAAGAAATTA TTTGCTGAAT CAAAATCAGA GGCAGGCTTT TTTAGGAGTG CGATAAATCC AAGAGCCCTT TTCGTTTCTG TCTGTTCTCA GGCTCCTCAA TTTAGGGGAT ATCAGCAGCA TGACAGTCAT GAGTTGCTTA GATGTTTGTT GGATGGTCTG AGCATTGAAG AATCGAGCCT GAGGAAGAAG TTTGGTGTTT CTGATAGTAA TGACAGTTCT ACATATCAGA AACCTACTCT CATAGATTCT GTATTTGGAG GTGAAATTTC GAGCACTGTT TCTTGTTTGG CATGCGGGCA TTTCTCAAAA GTGTATGAAC CCTTTTTGGA TCTCTCTTTA CCTATTCCGT CCAAGAAACT TCCTCCTAAA AAGCAACGAA TTGTTTCTCT GGCAAAGGAG GTCCTTAAGA ATGGGGCAGT CGGCAAAGAT TCAGAAGTTG GGTCAGCTAA ACCTGCATCG GATCACAATT TCACTGTTTC CAACCCTTCT GCTATGGCCC TTATTGATAA GCAGGTCTCT GATATCACAA CAGAATCTGA TACCGAACAA TACGAACTTG ATAAATTTTG GTCGGATTTG GACTTGCTAG GTGATGTTAG TGATACCGCC CCATCAACCA AGGCTAAAGG AGTTAATCAG ACTTTGGTAG GTAGCACAGA AACGCTGATG CATGATAATG ATGTAACTGC AAAACCAGAA ACTGTACCAG ATAAAGAAGA ATCACGAGCT ACGCAATCTA ATGAAGACAC ATCTGCAAGT GGGATTTCCG CAGTGATAGA TGAGGCTCAA GTTTTCCGTT CTCCTGATTT TGAGAAAAGT TCTTCATCTG CAAATCAGTG GGCTGATGAA GAGCTTCCCT TGATGGTTCC AGATTCTCAG GTTCTGTATA TGCCTTACAA AGATCATTTA TCCTATGATG ATAATACAGT TGCAGAAGGT AAGGATGGGG CTTTCTTGTC ATATGTCAGC GGCCCCCATG AACAAATCGA AGATCATTTT GACTGTAACG CTGATGAACC TGGCATCTCC TCTATTAATA TAACAGATAG GGCAGGTGAG GGCGAAGCTT CCTCGTCATT CGTGAGCGGT GACCATGAAC CAAAAATAGA CTATATTGAC TTTAGCAGTT TTTTTGATGA GCCTGAGATA CCCGAAGGAC CTGTTTTTAG ACTGCTATCT AAAGCTGAAG TTTCTGAAGC TGGTTTTATG GCTGACAGCA GTAATGATAA AACAGTTAGT GCAGGTAAGG GTGAAGCTTC CTCGTCATTC GTAAGCAGTG ACCATGAACA AAACATAGAT TATGTGGACT TTGCCAGTTT TTTTGACGAG CCTGAAATAT CGGAAGGGCC TTATTTTCGA CCATTATCTA AATCTGAAGT TTCTGAAGCT GGTTTTATGG CCGTCAGCAG TAATGATAAA ACAGTTAGGG CAGGTAAGGG TGAAACTTTT TCGTCATTCA TGAACGGTGA CAATGAAAGA AACATAGATT ATGAATCTAT TAACAGTTTA TTTTACGACC GTGAGACATC TGAAAGACCT GTTTTTGGAC CACCATCTAA AGCTAAAGTT TCTGAAGCTT GTTTTATGGC TGTCAGCAGC GACTCTGATC CTGCAGTTCT TGATGATTCG GATTCACCAG TGTCTGTAGA TAGGTGTTTG GCTCAGTTCA CCAAGCCTGA GATTTTGTCA GAAGACAATG CTTGGCATTG TGAGAATTGT TCGAAGAACC TAAAACTTGA GCGGTTGAGA GAAAAGAGAA AAACTGAAAG ATTGAGCAAA GGATGGGTGA ATGAAAATGG AGCTAGTTCG GTTTTTGATG AGTGTAGAGA CAATTCATTA AGTCAATCCT GTATAGATCC CGAAAACGGG TATAAAGCTG CTCCTCCGAT CACAGAATTG CCAAACTGCA AGGAAGAGGA AAACGCAATA GATGATGGAA TTCTGGGAGA CTCAGATCCA AAGCAAGCTC CAATTACTTC TTCTGTTACT GAAACTCCTA TCCTCGGTGG AGAAACCATC AGTTCTCAAC CAGCCAACGA CAATGAATGT GAAAACTGGG AAGACTTGGC AGTAGATTCT GAGAAAGTGA TAGTAAAAAG AGCTGCTACT AAAAAGGTAC TTGTAAACAA GGCACCACCT GTCTTGACCA TTCATCTCAA AAGGTTCAGC CAAGATGCTC GAGGCAGAAT AAGCAAGCTA AGTGGCCATG TTGATTTCCA AGAGTTCATT GATCTTAGCC AATATATGGA TACCAGGTGC TCCGAAGAAG ACCAGCCGGT TTACAGGTTG GCCGGGTTAG TGGAGCATTT AGGGACAATG AGAGGAGGTC ATTATGTTGC TTACATTAGA GGAGGCCACA AGGAGATGAG GCAGTCTGAT ATTAAAGAAC CAAACTCATC CATATGGTAT CACGCAAGCG ATTCTTTTGT TCGACGGGCT TCTTTGGAAG AAGTTCTCCG TTCTGAAGCG TATATCTTAT TTTACGAACG AATCTGA 
Length3297
Protein Sequence
Protein Residue
Map Locationscaffold_4: 14728553.. 14731935
Download Sequence
A.thaliana
AGI-codeAT2G32780.1
Descriptionubiquitin-specific protease 1
TAIR curator summary
Alias[ATUBP1][UBP1][ubiquitin-specific protease 1]
Gene coexpression
MR
MR Locus Description
6.32456 Ahg923084 F-box and associated interaction domains-containing protein
13.8564 Ahg925390
19.4422 Ahg926261
20.6398 Ahg919859 P-glycoprotein 10
24 Ahg496320
26.7955 Ahg900378
38.0657 Ahg932542 RNI-like superfamily protein
39.3827 Ahg352151 F-box family protein
50.951 Ahg492896 iron regulated transporter 2
51.3809 Ahg949596
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression