Detail



ID : Ahg906331

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|906331|Al_scaffold_0003_3459
Sequence
ATGCCCCATA TCTATAAGCA GCCCTTGGGT ATTGTCCAAG GTTTTGTTCT AACACTCACC GATGCAGAAG CTTCATTTAT TGCACAACGA CAGCTCTTGA CGTTACCTGA AAATGGCGAA CTTCCTGATG ATATTGAGTA TGAGGTTGAT CTTAAGGTGA CATTTGCCAA CCATAGGCTT AAGAGAGCGT ATATTGCTCT CCAAGCCTGG AAAAAGGCGG TGTATTCAGA CCCGTTTAAT ACCACGGGAA ACTGGCATGG CCCTCATGTG TGTGGCTACA CGGGCGTGTT CTGCGCCCCA GCTCTTGATG ATCCTAACGT TGCGGTTGTG GCGGGGGTTG ATTTGAATGG TGCGGATATT GCAGGGCATT TACCGGCTGA ACTTGGTTTG ATGACAGATG TTGCAATGTT TCATTTGAAT TCGAACCGGT TCTGTGGTAT CATACCTAAA AGTTTCGAGA AGTTGAGTCT AATGCACGAG TTCGATGTCA GCAACAACCG GTTTGTTGGA CCTTTCCCTT CCGTAGTCCT CTCATGGCCG GCCGTTAAGT TCATCGACCT TAGATACAAT GATTTCGAAG GTCAAGTCCC TCCTGAGCTT TTCAAGAAGG ATCTCGATGC CATTTTCTTG AACAACAACA GATTCACGTC TACCATTCCT GATTCTCTCG GAGAATCCTC AGCCTCCGTC GTGACCTTTG CTCACAACAA ATTCAGCGGT TGTATCCCTA GAAGTATTGG AAACATGAAG AATCTCAACG AGATTATCTT TAAGGACAAC AGTCTTGGCG GTTGTTTCCC ATCAGAGATC GGGAAGCTAT CCAATGTGAA CGTGTTTGAC GCTAGCATGA ACTCCTTCAC CGGTGTTCTA CCTCCAAGCT TTGTCGGGCT TACCAGTCTA GAAGAGTTTG ATATCTCTGG GAATAAACTC ACTGGGTTCA TGCCAGAGAA TATCTGCAAG TTGCCTAAAT TAGTTAACTT GACGTACGCC TACAATTACT TCAACGGGCA GGGTGATTCA TGTGTCCCAG GTAGTCAGAA GGAGATTGCA TTGGATGATA CACGCAACTG CTTGCCAGAT CGACCTAAGC AACGATCAGC CAAGGAATGT GCGGTTGTGA TTAGCCGTCC AGTCGATTGT AGTAAGGACA AGTGTGCTGG TGGTTCTAGC TACGTTACAC CGTCGAAGTC TCCATCACCT GTGCCAACTA GGCCAGTTCA TAAACCACAA CCACCGAAAG AATCACCACA ACCAAATGAC CCATATAATC AGTCTCCAGT GAAGTTTCGG CGTAGCCCGC CTCCACCACA ACAACTACAT CACCCTGTGG TTCACTCTCC ACCGCCTACA CCGCCAGTTT TATCTCCTCC TCCCTCACCG CCGGTCCATT CAACTCCATC ACCGGTTCAT AAACCTCAAC CACCGAAAGA GTCGCCGCAA CCAAATGACC CATATGATCA GTCACCTGTG AAGTTCCGGC GTAGTCCACC TCCACCTCCG GTTCACTCTC CCCCACCTCC ATCGCCAGTT CACTCACCAC CACCACCACC ACCAGTATAT TCTCCACCGC CCCCACCACC AGTCTATTCA CCACCACCAC CGGTTTATTC TCCACCGCCA CCACCACCAG TGCACTCTCC TCCACCGCCA GTACATTCTC CTCCACCGCC AGTCCATTCA CCACCACCAC CGGTACACTC TCCTCCCCCG CCAGTCCATT CACCACCACC TCCAGTCCAT TCTCCACCGC CACCAGTCTA TTCACCTCCA CCACCAGTTT ATTCTCCACC GCCACCACCA CCAGTCCATT CACCACCACC GCCCGTACAT TCTCCTCCTC CGCCAGTCCA TTCACCACCC CCACCAGTCC ATTCTCCTCC ACCGCCACCA CCGCCAGTCC ATTCACCACC TCCACCGGTA TACTCTCCAC CACCACCTGT CCACTCCCCT CCACCACCTG TATATTCCCC ACCACCACCA GTACATTCTC CTCCACCGCC GCCAGTAAAC TCACCTCCAC CACCACCACC ACCAGTCTAC TCTCCTCCAC ATTTACCGCC AAAAATGAGT TCACCACCAA CACAAACACC GGTCAACTCT CCTCCACCAC AAACACCAAC ACGGACAGTA GAAGCACCAC CGCCAAGTGA GGAATTCATC ATTCCACCAT TCATCGGCCA CCAATATGCT TCACCACCAC CTCCAATGTT CCAAGGCTAC TAA 
Length2223
Protein Sequence
Protein Residue
Map Locationscaffold_3: 19318796.. 19321103
Download Sequence
A.thaliana
AGI-codeAT2G15880.1
DescriptionLeucine-rich repeat (LRR) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.87401 Ahg479420 Leucine-rich repeat (LRR) family protein
15.4596 Ahg314403 C2H2 type zinc finger transcription factor family
29.5973 Ahg905397
35.8748 Ahg929770 Protein kinase superfamily protein
40.2989 Ahg903595 Alba DNA/RNA-binding protein
44.0908 Ahg342636 AP2/B3-like transcriptional factor family protein
53.376 Ahg908192
59.5147 Ahg945592
62.57 Ahg940106 proline-rich extensin-like family protein
63.7574 Ahg351609 Protein of Unknown Function (DUF239)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression