Detail



ID : Ahg479420

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479420|fgenesh2_kg.3__2121__AT3G19020.1
Sequence
TCATTATAGG CTTTCTCTCC ACAACATTCA TCTATTAAGC AAGCCATAGA GCCATTTCCA AGGTTTTTCA TCACCATGAC CCGAAGAACA ATGGAGAAGC CTTTTGGCTG CTTCCTTCTC CTCGTTTTTT TCACCATCTC CATTTTCTTC TACTCCGCAG CAGCTCTCAC CGATGAGGAA GCTTCGTTTC TCACAAGACG CCAACTTTTG GCATTATCAG AAAACGGAGA TCTTCCTGAC GACATGGAGT ATGAAGTCGA TTTAGACCTC AAATTTGCTA ATAACCGACT CAAAAGGGCT TACATTGCCC TTCAAGCTTG GAAAAAGGCA TTCTACTCCG ATCCGTTCAA CACTGCGGCT AATTGGGTTG GTCCAGACGT GTGTTCTTAC AAAGGAGTTT TCTGTGCACC AGCACTTGAC GACCCAAGCG TATTGGTTGT GGCGGGTATT GACCTTAACC ATGCGGATAT AGCCGGATAC TTGCCACCTG AGCTAGGTTT ATTGACAGAT GTCGCCTTGT TTCACATTAA CTCCAACAGG TTTTGCGGAG TTATTCCGAA AAGTCTTTCA AAGCTAACGT TAATGTACGA ATTCGACGTG AGCAATAACC GGTTCGTTGG TCCGTTTCCG ACAGTTGCTC TTTCTTGGCC GTCTTTGAAG TTCCTTGACA TAAGATACAA TGATTTTGAA GGGAAATTGC CACCAGAGAT CTTTGATAAA GATCTTGACG CCATCTTCTT GAACAACAAT AGATTCGAGT CGACCATCCC CGAGACAATT GGTAAATCAA CTGCTTCCGT CGTGACCTTC GCACACAATA AATTCAGCGG TTGCATCCCA AAAACCATTG GCCAGATGAA GAACCTCAAC GAGATTGTTT TTATTGGGAA CAACCTAAGT GGTTGCTTAC CGAACGAAAT CGGTTCGTTG AACAATGTGA CTGTGTTTGA TGCTAGCAGC AATGGGTTCG TCGGAAGTTT ACCATCGACC TTGTCGGGCT TAGCCAACGT GGAACAAATG GATTTCTCGT ACAATAAGTT CACCGGATTT GTCACAGACA ATATCTGCAA GTTGCCCAAA TTGTCGAACT TCACATTTTC TTACAATTTC TTCAATGGAG AAGCTCAAAG TTGTGTGCCT GGGTCGATCC AAGAGAAACA ATTTGATGAC ACGAGCAATT GCTTACAGAA TAGACCAAAT CAAAAGTCGG CTAAAGAATG TTTGCCGGTG GTAAGCCGTC CTGTGGATTG CAGTAAAGAC AAGTGTGCTG GTGGTGATGG AGGTGGCGGT GGTTCAAACC CATCACCAAA ACCAACGCCA AAGGCACCGG AGCCTAAGAA AGAAATTAAC CCACCAAAAT TAGAAGAGCC ATCTAAGCCA AAACCAGAAG AATCTCCCAA ACCACAACAG CCTAGTCCAA AGCCTGAGAC ACCATCACAT GAGCCTTCCA ACCCAAAGGA ACCTATGCCA GAGTCACCAA AACAGGAATC TCCAAAACCG GAACAACCAA AACCTAAGCC TGAGTCACCA AAACAAGAGT CGCCTAAGCA AGAGCAACCA AAACCAGAAC AGCCAAAACC CAAGCCTGAG TCACCAAAAC AAGAGTCTCC TAAGCAAGAG CCACCAAAAC CCAAGCCTGA GTCACCAAAA CAAGAGTCGC CTAAGCAAGA GCCACCAAAA CCAGAAAAAT CTCCTAAACC GGAACCTCCT AAACCAGAGA CGCCAAAACC AGAGATGCCA AAACCAGAGG AGTCACCTGA GCCTCAACCA CCAAAGCAAG AACAACCACC AAAGACAGAG GCACCAAAAA TGGGGTCGCC TCCATTGGAA TCACCGGTAC CAAATGATCC TTACGATGCA TCTCCGATTA AAAAACGTCG TCCTCAACCA CCGTCACCAT CAACAGAAGA GACAAAGACA CCGTCGCCAC AATCTCCATC AGTACACTCT CCACCACCAC CGGTTCATTC CCCACCGCCA CCTGTATTTT CACCTCCTCC TCCGGTGCAT TCTCCTCCAC CACCGGTTTA CTCGCCACCA CCTCCATCCA CTCTCCTCCT CCACCGGTAC ACTCTCCTCC TCCACCGGTT TACTCGCCAC CACCTCCTGT ATACTCTCCG CCACCACCAC CAGTCCACTC TCCGCCTCCA CCAGTCCACT CTCCTCCTCC ACCGGTACAC TCTCCTCCTC CACCGGTCCA CTCTCCACCA CCACCACCAG TTTTCTCTCC ACCACCGCCT GCACCAATCT ACTCTCCTCC TCCACCACCA GTCCACTCCC CGCCTCCACC CGTGCACTCT CCACCACCGC CACCAGTCCA CTCACCGCCT CCTCCTGTTC ACTCACCGCC TCCTCCAGTA CACTCTCCAC CACCTCCAGT TCATTCTCCA CCACCACCAG TCCACTCTCC ACCACCTCCT TTTCTCACCG CCACCAAAAC CTGTAACGCC TCTATCACCG GCAACAACAC CAACGGCAAA CGCTCCAACA CCTTCATCAG AATCAGGAGA AATCTCATCA CCGGTTCAAG CTCCGACCCC AGACTCTGAG GACATCGAAG CACCATCAGA ATCAAATCAT TCACCAGTGT TCAAATCAAG TCCTGCTCCA TCACCAGATT CCGAGCCAAA TCACTCCCCG GCTCCAGTTT CCGAACCAGA AGTTGAAGCA CCAGTTCCAT CAAGCGAACC AGAAGTTGAA GCACCAGAAC AATCAGCAGC CACACCCTCG TCACCGACGC CATCTTCAAA TCCATCACCA GATGTAACTG CACCACCATC GGAAGACAAC GACGGCGGCG ATAATTTCAT CCTCCCACCA AACATTGGAC ACCAATATGC ATCGCCACCA CCACCGATGT TCCCAGGCTA CTGAACCAAA CATTTTTAAT ATTTACATTT TGGTCCAAAA TTTTTCCGGT TAACCCAATT TGTAACAAGA AAAAAATACA TTTATAATTT GACCATTGTA ATCTGTAAGT AGATGATTTT TAGAAGTGAA TATTTTCAAA TTAACCGTTA ACATATCTGT AACTCTATGT TTTATA 
Length3046
Protein Sequence
Protein Residue
Map Locationscaffold_3: 7708477.. 7711587
Download Sequence
A.thaliana
AGI-codeAT3G19020.1
DescriptionLeucine-rich repeat (LRR) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.08276 Ahg323992 hydroxyproline-rich glycoprotein
7.87401 Ahg906331 Leucine-rich repeat (LRR) family protein
8.12404 Ahg355525 transposable element gene
10.9545 Ahg938381 Proline-rich extensin-like family protein
17.4356 Ahg916456 proline-rich extensin-like family protein
17.9444 Ahg931786 proline-rich extensin-like family protein
18.1108 Ahg940106 proline-rich extensin-like family protein
21.2132 Ahg912232 Proline-rich extensin-like family protein
21.3542 Ahg473807 ECA1 gametogenesis related family protein
21.4942 Ahg905397
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression