Detail



ID : Ahg908894

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|908894|Al_scaffold_0002_1975
Sequence
ATGGCTTCCT CGTCCTTGTC AACTCTTGTT AGGAGCAACT ATGATGTCTT CCTCAGTTTC AGAGGGAAAG ACACTCGGCG CACCGTAGTC AGCTTTTTGT ATAAAGATCT TATACGCCAG GGAATTCTTA CTTATAAAGA CGATCAGGGG ATCGGGGCAG GATCCGAAAT TAAGGAAAGG CTCATCGAAG CCATAAAAAC TTCACAGGTC GCTGTTGTCT TCATCTCGGA GAACTATGCT ACCTCGCAAT GGTGCTTGGA GGAGCTCCGA TTGATAATGG AGCTTCATAG CGTGAATCGG ATTCATGTGG TTCCCATCTT CTACAGAGTC GATCCTTCTG ACGTGAGACA CCAGAAAGGA AGATTCGCGG CTGCCTTTCA AAAGCACGAA GATAGGGAGC CGAATAGGGC TTCCCAATGG AGAAGAGCTC TCAACCAAAT TAGTCATATA TCAGGCATTC ATTCCACGGA ATGGGATGAT GACTCAGCGA TGATAGACGA AGTAGTTGTA AGCATCTCAA GGCACCTGCT GCTAAGGATG GAGTCAACTG TTTTGAACAG TTTAGTTGGG ATGGAAGCAC ACATGGTTAA AATGAATCTC ATTTTCAATA TGGGATCTGA AAACCAGGTT CTCTTTATAG GAATATGGGG TATGGGAGGC ATAGGCAAAA CCACCATTGC CAATTGTCTA TATGACCGAT TTTCAAGTCA ATTCTCAGCT CGTTATTTCA TTGAAGACAT TAAGAATATT TGTAAGGACA AGAGTCCTGC GTACTTACAG GAAAGATTCC TCTCCAGAAT TTGTGGTGGT TTAGATATTG GTTTTCGAAG CCATGAAGCA AGATCGCAGG AGATAATCGC AAGACTCGGG CACCAAAAAA TACTTATTGT GCTTGATGGT GTGGATAAAG TGGAGCAGTT ACATGCCTTG GCAAAAGACA CGAGCTGGTT TGGTCCAGGG AGCCGAATCA TCATAACCAC ACGAGACAGG GGCCTGCTCA ATTCCTGTGG AGTAAACAAT GTATATGAGG TTAAGTGCTT GGATGATAAG GATGCCCTCC AGGTATTTAA AATTTCAGCT TTGAGAGGAA GCCCGCCACC TTCAGATGGA TTTGAGCAAC TCTTCATCAG AGCTTCTCGG CTGGCACACG GTCTTCCCTC TGCCCTTGTG ACTTATGCCA CATATCTCAG ACAAAACACA ACCATAAAGA AGTGGGAAGA GGAATTAGGT TTACTTGAAA CAAGTCCTCA CAAGAATGTC AAGGAGATTC TGAGAAATAG CTACGACGAC TTAGATGAGC AAGACAAGAC AGCTTTCCTT TATGTTGCAT GTCTCCTTAA CGGCTACCCT TTCAACCATG TCACTTCCCT TCTTGATGAC GGCCGTCCTA GGATGAATCA TTTAACTGCA AAGGCTCTTA TCAGCATATC GATGGATGGA TGTATAAACA TGCATTTCTT GGTCGTACAA ACAGGAAAGG CAATTGTGCG CCAAGAATCC AGGAATAGGC CTTCCAGGCA AAGGTTTCTA TGGGATCATA AAGAGATCTA TGATGTCCTA GATAACAACA TAGGTACAGA CGAAATTGAA GGTGTGACAC TGCACATGTG TGAGATGCCT GATAAGTTAC CTATGAGTAT TACAGTATTC AACATTATGC ATAGCATCAA ATTTCTCAAG TTCTTCAAGC ACTTGGGTGA TGCAGAGTCC AACGTGCAGC TCAGCGAAGA TGGTTTCTAT TTTCCCCGTA ATATTAGGCT ACTACATTGG GATGACTATC CAATGAAAAC CTTGCCATCC ACACGTTCCG ACACCACCAC CTTGTCGAAC TCAATCTCCA ACGGAGCAAC CTCGAGAGCC TCTGGGATAG CACGGTGGAA ATTACGAAGA CTGGATTTGA CAGGCTCGAA GAATCTGAGA GAGCTTCCAG ATCTTTCAAC AGCCGTGAAC TTTGAGGAGT TGATAATACA AGGCTGCAAG AGGCTACGGA ATATCTCAGA GTCCATAAGA AGATTACATA CTCTCACGAA ACTCAATGCA ATCGACTGCT TCCTTAGGGG TGTCGAGTTC AGTGTTGAGT TAAGTAACAA CTACATATGT GGAGGCAGCT CCGGAACTTC CTTGTCGTTT CCGAAAAACG CAATGATGTT CCCGTTTCTT AAAAATCTAT CAATCGAAGG CAAACTATAT ATAGAGTTGT TGGGCCTTAA CGGAAAAGCA GAGCACCTCT CTTTTGGTTC CAAGCAACAG ACCCCTGATC AGTCTATGAC GATAGAAGAG GAACCAGGAA TGCCTCAGCT CATGTCAGAT TCTAACAGTT CAAAATCGCT TGAGATCAAG CAGTTTAGTT ACAATGAGAA TCGTGCTCCT TTCCGTTGTT CCAACTTTCA AAATGTTCCC TGTTTGACAG AGCTAAAGCT GATAAACTTA AACATCCACT ACATCTCGAA AGACATAAGC CACTTGCAAT TCTTAGAGAC ACTTGACCTC GAAGGAAATG ATGTCAAGTA TCTACCACAA ACCTTGGGAC AACTGCCCAA GTTGAAGTAT CTCAGCCTTC GAAACTGTCG CCAACTTAGG GAACTGCCAC AACTTACTCA GGTGGAGACG CTCATACTTT CTGACTGTGT GAACCTCTCA TGGTTGCTGG ACGAACTGGA CACATACTGC TTGCTTGAGC TTTGGCTTGA TAACTGCAAG GATGGGATGA TGAGTATTGA GTACCCAGTA CCTACGTGTC CTAATTCTCA TGGATCAATC AAGGGCTTAA AAAGCCCATA A 
Length2781
Protein Sequence
Protein Residue
Map Locationscaffold_2: 14664619.. 14677599
Download Sequence
A.thaliana
AGI-codeAT1G17600.1
DescriptionDisease resistance protein (TIR-NBS-LRR class) family
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
38.7298 Virus0716
40.2989 Ahg926124 VQ motif-containing protein
40.8412 Ahg483267 polygalacturonase abscission zone A. thaliana
48.6826 Ahg952365
59.3296 Ahg944634 Transcriptional factor B3 family protein
68.775 Ahg948553 Protein of unknown function (DUF581)
69.9714 Ahg897488
83.2827 Ahg356638 FAD-binding Berberine family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression