Detail



ID : Ahg914136

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|914136|Al_scaffold_0001_4390
Sequence
ATGTTTCATC AGCTCAAAGC CTTGCTCGAT CTTCCATTAC TGTTTCTTCA TCTCAAGCAG ATCCATTGCT TAGTCCTCAC TTCTCCGATC TTCTACACTC GCCGCGATCT CTTTCTCTCC CGTCTTCTCC GTCGCTGCAC CGCCGCTACT CAATTCCGGT ACGCTCGTCG TTTATTATGT CAAATCCAAA CTCCCAGCAT TCAACTATGG GATTCGCTCG TTGGTCACTT CTCCGGTCGG GTTACTCTCA ACCGTCGGTT ATCGTTTCTT TCTTATCGTC AAATGCGGCG AAACGGCGTC GTCCCTAGCC GCCACACGTT TCCTCCGCTT CTCAAGGCGG TTTTCAAACT GAGAGACGCT AATCCGTTTC AGTTTCATGC TCATATCTTG AAATTCGGGT TCGATTCGGA TCTTTTTGTG AGGAATTCGT TGATTTCGGG TTATTCTAAT TGTGGGTTAT TCGAATTTGG AAGCCGTGTT TTTGATGGAA CTGAAGATAA GGACGTGGTT TCTTGGACTG CGATGATTGA TGGGTTTGTG AGAAACGATT CTTCTTTGGA AGCAATGACG TACTTCGTGG AGATGAAGAG GTCTGGAGTC GCGGCTAACG AAATGACTGT TGTTAGCGTC CTGAAAGCTA CACGGAAGGC TGAAGATGTT CGATTTGGGA GAAGCATTCA TGGGTTTTAC TTAGAAGCAG GAAGAGTGAG GTGTGATGTG TTCATAGGAA GTTCTCTAGT AGATATGTAT GGGAAATGTG GTTGTTATGA TGATGCCCAG AAAGTGTTCG ACGAAATGCC TAGCAGAAAC GTAGTTACTT GGACCGCATT GATTGCTGGA TACGTGCAAG GCCGTTGCTT CGAGAAAGGG ATGTTTGTTT TCGAAGAGAT GTTAAAGAGT GATGTTGCAC CTAATGAGAA GACTCTAAGC AGTGTTCTTT CGGCATGCGC TCACGTAGGG GCACTTCACC GAGGAAGAAG GGTGCATTGT TATGTGATTA AGAATTCGAT TGAGATAAAC ACTACAGTGG GAACAACATT GATTGATTTT TATGCCAAGT GCGGGTGTTT AGAGGAAGCT ATATTGGTTT TCGAGAGACT TCGTGAAAAA AATGTGTATA CTTGGACAGC GATGATTAAT GGATTTGCAG CGCATGGATA TGCAATAGGC GCTGTTGATC TCTTTCATAC CATGTTGAGT AGTCATGTTT CACCAAATGA AGTTACTTTC ATCGTTGTCT TAAGCGCCTG CGCTCATGGA GGCCTTGTGG AAGAGGGTCG AAGGCTTTTC CTAAGCATGA AGGAACGTTT CAATTTGGAG CCAAAAGCGG ATCACTATGC GTGTATGGTT GATTTATTTG GAAGAAAAGG TTTGCTAGAA GAGGCAAAAG CTTTGATAGA GAGAATGCCA ATGGAGCCAA CAAATGCGGT ATGGGGAGCT CTGTTCGGGT CTTGTTTGAT ACACAAAGAC TATGAGTTAG GTAAATACGC AGCCTCCCGT GTGATCAAGC TGCAACCTAG TCACAGCGGG AGATACACAC TCTTGGCTAA TTTGTACTCG GAATCCCAAA ACTGGGATGA TGTCGCTCGG GTAAGAAAGC AAATGAAAGA TCAACAGGTG GTGAAATCAC CGGGATGTAG CTGGATCGAA GTGAAAGGTA AGCTTCATGA ATTCATAGCT TTCGATGATA AGAAACCCCT TGAATCTGAT GATTTGTACA AGACTCTCGA CAACGTAGGG GTGCAAATGA GATTGCCAGA TGAATTGGAA GATTTGACTT CTCAATCTTG A 
Length1791
Protein Sequence
Protein Residue
Map Locationscaffold_1: 25044045.. 25045823
Download Sequence
A.thaliana
AGI-codeAT1G50270.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
26.4197 Ahg488725 Protein of Unknown Function (DUF239)
37.0945 Ahg926666 Glucose-methanol-choline (GMC) oxidoreductase family protein
45.607 Ahg919288 SIGNAL PEPTIDE PEPTIDASE-LIKE 5
64.1327 Ahg485379 ATP binding microtubule motor family protein
64.622 Ahg914843 Protein kinase superfamily protein
71.624 Ahg943550 glycerol-3-phosphate acyltransferase 3
72.952 Ahg318072 Protein of unknown function, DUF547
78.0385 Ahg491877 GDSL-like Lipase/Acylhydrolase superfamily protein
90.7304 Ahg487235 3-ketoacyl-CoA synthase 19
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression