Detail



ID : Ahg918359

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|918359|Al_scaffold_0008_3110
Sequence
ATGAAATTGC ATGATTTATC ATTCTTTCAG CTGAAGAGAG GGCAATCTTT GCTTTATTTT GTTTTCTGTC AAAATCTTTG TTCTTCCTCC TCTATGTCTA ATCCATTCTT CTTCCTTTCC TTTGTCCTCC TCCTTCCTTT TGTTGTTGAT TCACTTTACT TCAATTTTAC TAGTTTTCGG GCAGGTGATC CCGAGAACAT AGTATACCAT GGGGATGCAA CGCCTGATGA AGATGGAACG GTGAACTTCA ACAACGCTGA ACAAACATCT CAGGTTGGTT GGATTACTTA TTCCAAGAAG GTGCCTATAT GGAGTCATAG GACTGGTAAG GCTTCAAATT TTAACACCAG TTTCTCCTTC AAAATCGATG CTCGTAACCT TTCAGCAGAT GGTCATGGAA TCTGTTTCTT TCTTGCTCCT ATGGGAGCTC AACTACCTGC ATACTCAGTT GGTGGTTTCT TGAATTTGTT CACTCGAAAG AATAATTACT CGTCTTCGTT TCCGCTTGTT CATGTCGAAT TTGACACATT CAACAATCCA GGATGGGATC CTAAGGATGT TGGATCTCAT GTCGGGATCA ATAACAACTC TCTTGTTTCT TCCAACTACA CTTCTTGGAA TGCAAGCTCA CACAACCAAG ATATTGGTCA TGCAAAGATC TCTTATGATT CTGTGACTAA GAATTTAAGT GTGACTTGGG CTTATGAGCT AACAACCTCT GATCCTAAGG AAAGTTCAAG CCTTTCTTAC ATCATCGACC TCACAAAGGT TCTGCCATCA GAAGTTATGT TCGGGTTTAT AGCTGCTGCT GGAACAAACA CAGAGGAACA TAGACTTTTA TCATGGGAGC TCAGTTCAAG TTTGGATAGC GAGAAAGTCG ATAGCAAGAT AGGATTGGTA GTTGGCATTT CGGTTTCCGG ATTTGTTTTT CTGACATTTT TGGTTTTCAC AATCGTGGTG GTTTGGTCGC GGAAGCAAAG AAAGAAGAAA GACAGAGATA TAGCAAACAT GACATCATTA AACGAAGACC TTGAAAGGGA AGCAGGACCA AGAAAGTTCT CTTATAAGGA TCTTGTGTCA GCAACCAACA GATTCTCAAG CCATAGAAAG CTAGGTGAAG GAGGGTTCGG AGCGGTTTAT GAAGGAAACT TGAAAGAAAT CAATACAATG GTTGCGGTGA AGAAATTATC CGGTGATTCA AGGCAGGGAA AGAAAGAGTT TTTAAATGAA GTTAAGATCA TCAGCAAACT AAGACATCGA AACCTCGTGC AACTCATTGG TTGGTGTAAT GAAAAAAACG AGTTCTTGCT GATATATGAG TTAGTGCCAA ATGGTAGCTT GAACTCTCAC CTCTTTGGCA AAAGACCTCA TTTACTTTCT TGGGAGATAA GGTACAAGAT AGCTCTTGGT TTAGCCTCTG CTCTGCTTTA TCTTCATGAA GAATGGGATC AATGTGTACT GCACAGAGAC ATCAAAGCAA GCAATATAAT GCTTGACAGT GACTTCAATG TAAAGTTAGG TGATTTCGGG TTGGCTCGGC TTATGAACCA TGAACATGGT TCCCATACAA CAGGATTGGC TGGAACTTTT GGGTACATGG CACCTGAATA TGTAATGAAA GGAAGTGCGA GTAAAGAGTC TGATATATAT AGCTTTGGAA TTGTTTTACT AGAGATTGTC ACAGGGAGAA AATCGTTGGA ACGGACGCAA GAAGATAACA GTGATTCAGA GAGTGATGAG AAGAGTCTTG TGGAGAAAGT TTGGGAACTT TATGGAAAAC AAGAACTGAT GACTTCATGT GTTGATGAGA AATTGGGTAA TGAGTTCGAT AAGAAAGAAG CTGAGTGTCT TCTGGTTTTA GGGTTATGGT GTGCTCATCC GGATAAAAGC TCGAGACCTT CGATAAAACA AGCGATCCAA GTCTTGAAAT TTGAGTCACC ATTGCCTGAT CTTCCATTGA AGAGGCCTGT TGCTATGTAT TACAACTCGA CTACGACTTC TTCTTCTTCT CCCTCGGTTA ACTCAAATGG TGTTTCGGTA ACGTTCTCAG GCATCGAGTA TGGTCGTTAA 
Length2070
Protein Sequence
Protein Residue
Map Locationscaffold_8: 20675225.. 20678573
Download Sequence
A.thaliana
AGI-codeAT5G65600.1
DescriptionConcanavalin A-like lectin protein kinase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
40.05 Ahg358371 Pectin lyase-like superfamily protein
50.04 Ahg345991 Protein kinase superfamily protein
60.3987 Ahg904884 RNA-binding protein
64.3428 Ahg945147 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
82.668 Ahg924140 HEAT/U-box domain-containing protein
86.5332 Ahg894206 sugar transporter 11
92.5635 Ahg483504 Pectin lyase-like superfamily protein
95.5039 Ahg344097
97.9183 Ahg934862 Protein kinase superfamily protein
98.0306 Ahg924091
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression