Detail



ID : Ahg918487

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|918487|Al_scaffold_0008_3238
Sequence
ATGTCGGAGG AGAAGGTAAT CATTGATCTC TGTAGCTCGG AAGAAGATGT TTCCGGTGAT GAGAATAACT ATGACGAAAC GGAAGAAGAA GCCGAAGAAG ATACGAATTC AAGTGAGGAT GATAGCGATT GGAGCCACGA TGATGATTAT GATGCTACGG AGTCAGATGT TGAAGCTGAC GATACCGGGG AGAAAGACGA TGATGATGAG GACGACAAAG TCACTCGCCT CCTCACAGCC GGAAGCGATT TGAAATCTGT GAATGTGAAA GAGTGCAAAG CATATCTGAG AAAGCATGGT CTAAGATTAT CTGGCACCAA ACCAGTTTGT ATTGACAGAA TTGTTGAGCA TTGGAGGATT AAAGATGGAA GCGGAGAAGC AGTGTATCCA AGATCATCCT TTGCTATCAA TTGTAAAGGT GATGTCTGCA AAGGAGATAT TGTTTTGTTT ACACAGAAGG TTCACCACAA GTACGAAAAG ATGAAAAGGA GTGGAAATAT TATGGGGAGA AGAACTGTCG CTGGCCAGGT TGTTAAAGAA AGCTATGGTA CTGCTAAACA ACAACACACT TTCACTATTG AAGTGCTCTG GTGCGAGGGG ACACAGAAAT TGCCTCCTTT GTATCCATTA CTAGTCAAAG GACGAAATCT TTATAGGTTA ATGACCTTGA GGCAGCGATG GCCGAATGAA GAAGACAGAG TCAAAGTTCT TAACGAAAAG CATAACCGTG GTGCCGCAGC AAGAAAGGTT ATGAGAGAAA GGAAAATTAA GTCAGGCTAT GTACTAAAAG ATGGAAGACT TCAAAAGCCT GGTCATGTGA AGAAGCCTTG TCAAGTAAAG ACAAGAAAAA ACGAGAAAGA TGAGAATCTA ACCCAGAGGC TTAGACAAAA CGCTCCAGCT AATCATTCAC TTGATGCTTT TCCAAACCAA AATCCTTCAC AGGGCCATAA GAATCCAACA CAGTTGAGAA ATATGAATCC CCCTCATTCA TATGCTCCTC GTTCACATGC ACCTCCTACA TATGCTCCTC GACCACATGC TCCTCTTACA TACGCTCCTA TCAATTCACA TCTTCCTCGT CCAAACATTT CTCCTTACCA CCCCTATACT TATCCAACAC AACAAAACCA AACAAACCAA AGACCACCAC CTGCCTCCTA TACTTATCCA ACACAGCAAA ACCAAAGGCT ACCACCTGCC TCCTATACTT ATCCAACACA GCAAAACCAA ACAAACCAAA GACCACCACC TGCCTCCTAT ACTTATTCAA CACAGCAAAA CCAAACAAAC CAAAGACCAC CACCAGCTTT CTACAACAGA AGACCTGCCT CTAATGCCCT GCAGGGACAA GCATCATTCA ATCCACATGC CAATACACAC GCTGTGCCGA TTACTCATCA GAGGAGACCA TACCAGAATC ACCATGTCGG CTCGAACAGT GGCTACAACC TCGGAGTGAG GGACTTGGAT CACTTCTCGC ATATGATGAT AAGCCACAGA GCAGAAGGAG ACACATACAG GCAGAGTGAG GTCTCTCAAG GACCATACAT GAACCATCAG ACCTACCATT CCAACTTCAG TAGTGGCTAC AACCATGGGG CAAGGGACTT GTACATGGTA AACCACGGAA GAGAAGGAGA CAATCACAGA CCAAATTATC GATAA 
Length1665
Protein Sequence
Protein Residue
Map Locationscaffold_8: 21207748.. 21210091
Download Sequence
A.thaliana
AGI-codeAT5G66840.1
DescriptionSAP domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
49.6185 Ahg917747 ferric reductase-like transmembrane component family protein
50.5964 Ahg325218 ROP guanine nucleotide exchange factor 5
59.808 Ahg338071 GRAS family transcription factor
76.5245 Ahg917658 subtilase 4.13
80.9938 Ahg342596 chromatin remodeling 40
83.0422 Ahg908402 glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS, putative
85.3639 Ahg496986 Chalcone-flavanone isomerase family protein
85.4166 Ahg941515 ovate family protein 8
88.1476 Ahg951906 MATE efflux family protein
88.4647 Ahg943440 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression