Detail



ID : Ahg921553

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|921553|scaffold_102834.1
Sequence
GTTCATGGCG CAGATAGACC AACAATGAAG CTTGGAGTTG CTGGCAAGCC AAAAATAGAT GTCATAAAAG CTATGCCTCA GGTGGATGAA AATGAAGTTG CTAAAGAAGT AGAAGACAAT GCATCAAAGT CGCATGATTC AGTTCCTGGC GCAGATAGAC CAACAGTGAA GCCTGGAGTT GCTGGCAAGC CAAAAACAAA TGTCATAAAA GCTATGCCTC GGGTGGATGA AAATGAAGTT GCTAAAGAAG TAGAAGATAA TGCATCAAAG TCGCATGATT CAGTTCCTGG TGCAGATAGA CCAACAGTGA AGCCTGGAGT TGTTGGCAAG CCAAAAACAG ATGTCATAAA AGCTATGCCT CAGGTGGATG AAAATATAGT TGCTAAAGAA GTAGAAGAAA ATCTTCGCTC TCCCATTTGC TGCATCATGG GTCATGTTGA TTCTGGTAAA ACAAAGCTGT TGGATTGCAT CAGAGGAACA AATGTTCAGG AAGGTGAAGC TGGAGTTATT ACTCAACAGA TTAGTGCAAC ATATTTCCCT GCAGAAAACA TCCGTGAGAG GACCAAGGAG TTACGTGCTG GTGCTAAACT CAAGTTGTCA GGTCTATTGG TTATCGATAC ACCTGGACAC GAGTCATTCA CAAATCTGTG GTCAAGGGGT TCAAATTTGT GTGACTTTTC AATTCCAGTG GTTGACATAA TGTGTGGTCT AGAGCCACAA ACCTTAGAAT CTCTGAATCT TTTGAGAAGA AGGAATGTAA AGTTCGTTGT TGCCTTGAAT AAGGTGAGAC TTCTTGTCAT TTTGTTGGCA TGTGTTTGGT ATTCTTTATT GTCACTGATG TATGGCATAA AACCTCCAAA TTTTAGGTGG ATACGATATG TGGGTGGGAA AAAAAGCAAG AATGCTCCTC TATTGAAGAC AATGAAGCAA CAATCGAGAG ATGTGGTTAA TGAATTTAAC ATGAGAGTAG ATCATGTTAA AACCCAGTTC CAAGAACAAG GAATCAATTG TATGCTTTAT TACAAGAACA AAGAAATGGA AGAAACTATA TGTATTGTAC CTACTAGCGC TATTAGGTCT CAGATTTTTT TTGGGGAAGG GATCCCAGAT CCTTTGATGT TGTTGGTTCT ATGGGCTCAG AAAACAATGG TGGAGAAACT CACATATGTT GATAAAGTGC AGTGTACTGT CCTTGAGGTC AAAGTTATTG AAAGCCATGG TATTACTGTT GATGTTGTTT TGCTCAACGG TGTACTCCGT GAAGCTGATC AAATCGTTGT TTGTGGGTCA CAGGGACCAA TTGTAACAAC TATTAGATCA TTATTGACTC CTTATCCTAT GAACGAGACG CGGGTGAAGG GTACCTATAT GGCACACAGG GAAGTAAAGG CTGCACAGGG TATCAAAATT GCAGCACCGG GCCTTGAACA CGCTATTGCT GGTACTACCT TGCATGTGAT TGGACCTAAT GAGGACATGG AAGAAGCCAA GAAAAATGCC ATGGAAGATA TTGAATCAGT TATGAACCGC ATTGACAAAA GTGGTGAAGG AGTTAATATT CCAAATCTCT ACCAGTTTCT TACAAGTTCT CCCAATGTTG AATCTGAGGA TGATGTGCTT GAAAATATCT CCGAAGAAGA CCTTCTAGAT GGAGTGCCTG AGGACGAGGA CATGCTTGGA GAAATCTCTG AAGATGAGGC AGGAGATGCA CTAGAGGAAA TTGTTGAGGA CATTGTACAT GAGGAGGCTG TGGAAGGCCC AGTGGGTGTA CACAACATTG GAGATGTGCT TAGAGCTGCT TGGGAAAAGA AGGAAAGGAA GAATGCATCA AAGCGAGAGA AATCTCCTGC CACCAAAGCC CGCATCAAAG CTGCAAAGAA GAAAAAGGCT GCTCTGAAGA AGGCTGAGAA TCGGCAGGCT CATAAGACCA ACAAGGGGAA CTACCAAGGT ATGAAAAATG CACATGCAAC CATCTTCCCG AAAAAGTTGA GTCACATGCC AAGCAGGAAA CAGACGTTAG ATTCTGTGAG GATAAATCTC TTATGAGACA GTAAAAAAGG TAAATC 
Length2066
Protein Sequence
Protein Residue
Map Locationscaffold_1: 10537124.. 10540053
Download Sequence
A.thaliana
AGI-codeAT1G21160.1
Descriptioneukaryotic translation initiation factor 2 (eIF-2) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
23.8118 Ahg888247 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
27.1662 Ahg899363 Rhodanese/Cell cycle control phosphatase superfamily protein
45.8912 Ahg475098 Immunoglobulin E-set superfamily protein
50.04 Ahg923590
55.2087 Ahg487602 NAC domain containing protein 80
67.3647 Ahg351806 Galactose oxidase/kelch repeat superfamily protein
74.0338 Ahg947836
76.9935 Ahg947274
80.9444 Ahg942573
89.6158 Ahg358371 Pectin lyase-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression