Detail



ID : Ahg925154

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|925154|scaffold_200715.1
Sequence
TTCTGACATA ATTCCTCTGC TAATGGTAAA GAGCATGTAC GTGGTCAAGC GCGATGGATG GCTGGAAACT GTTGACTTGG ACAAGATTAC TTTGCGACTT AACAAGCTAA GTAATGGGCT TAGCAGTTAC CATTGTGACC CCTCCTTGTT GCTCAGAAAG TCTCTGCTCG TTTCTATAAT GGAATCACTA CGACTCAACT CGATGACTTG GCTGCTGACA CTGCTGCTGC CATGTCTTGT AACCATCCTC ATTATGCCTC GGGAAATCGT ATATGACCGT GATTTTGATT ATGATTTCTT TGGATTTAAA ACGCTTGAGA GGTTGTACCT CTTGAAAGTC CATGGGAAAG TTGTTGAAAG GCCTCAACAC ATGCTCATGA GAGTTGTTGT TGGCATTCAC ATGGAAGATA TTGATTCTGC AATCAAAACT TACCATTTGA TGTCTCAGAG ATTGTTCACT CATGCATCTC CTACTCTCTT CAACGCAGGA ACTCCAAGGC CTCAATTAAG TAGCAGCTTT CTTATCTGCA TGAGAGATGA TAGCATCGAG AGCACACTCC AAAAGTGTGA TGTTATAAGA AAATCTGCAG GCAGTATTAG TGTTTCAGTT CATAACATCC AGGGCACAAA TGGTGTTGTT CCAATGCTGG ATGTTGATCA AGGAGGAGGT AAGAAGAATG GACCATTTGC TGTATACCTG GAGCCATGGC ATGCTGACAT CTTTGAGTTT CTAAAGATCC AGAAGAACCA CGGAAAGGTA CAGAACAGTC AGGAGGAGCA CATGGCTATA GCTCTCTGGA TACCAGATCT TTTCATGGAG AGAGTCAAAC ATGATGGGAA GTGGTCATTG TTTTGTCCTA ATGAAGCTCC AGGTTTGGCA GATTGCTGGG GCACAGAATT TGAGAGACTG TACACAAAGT ATGAAAGAGA GGGAAAGGCG AAGAAGGTTT TTCCGGCGCA GGAACCTTTT TTTGATATCT TGACATCCCA GCTAGAAACA GGAATGCCAT ACATGCTTTT TAAGGATTCA TGCAACAGAA AAAGCAATCA GCAAAATCTT GGTACCATAA AGTCCTCTAG TTTATGTACT GGAGTTATTG AGTACACTAG TCCAACGGAA ACCACTGTGT GCAATCTTGC ATCAATTGCT TTGGACGTCC CATTGGACTC TCATCCATCT AAGCTTGCTG GCAGCCTGCG GTCAAAGAGT CGTTACTTTG ATTATGACAA GTTAGCCGAG GTAACTGCAA TTGTTACTAA TGATCTCGAT AGGATAATAG ACGGAAACTA CTATCCTGTG GAGACTGCAG AAACTTCAAA CATGCGTCAT AGACCTATTG GTATTGGAGT ACAAGGTCTT GCAGATGCAT TTATCCTTCT TGGAATGCCA TTTGACTCTC CAGAGGCCCA AAAACTAAAT AAGGATATAT TTGAAACCAT ATACTACCAT GCACTCAAAG CATCTTCAGA GCTTGCTGCA AGAAATGATG CATATGAGAC ATACAAAGGA AGTCCCATGA GCAAGGGGAT TCTTCAACCT GACATGTGGA ATGTGACTCC ATCAAACCGC TGGGACTGGG ATTTTCTTAG GGAAATGATA TCAAAGAATG GAGTGAGGAA CTCTCTTTTA GTATCACTGA TGCCAACTGC TTCAACCAGT CAGATTCTCG GGAACAACGA ATCTTTCGAG CCATACACAT CAAACATCTA CAGCCACAGA GGATTGAGTG GGGAATCCAT ACTTGTGAAT AAGCATCTTC TTCATGATTT GACTGAAATG GGTCTTTGGA CTCCAACACT GAAAGAGAAG ATCATTGATG AGAACGGTTC GATACGTAAT GTCCCAGAGA TACCTGATGA CATGAAAGCT ATTTACAGAA CTGCATGGGA GATTAAACAA AGAACCGTGG TCGACATGGC TGTTGATCGT GGATGCTACA TAGATCAAAG CCAAACCTTA AACATAAACC TGGAAGAACC TAGCTACCAA AAACTCACTT CTTTACACTT TTATACTTGG ACTAAGGGTT TGAAAACCGG GATGCACTAC CTGCGATCAC GTGCTACAAC TATGGTCAAA TGTAAATAAA GAAGTAGAAG ATAGTAATG 
Length2109
Protein Sequence
Protein Residue
Map Locationscaffold_2: 3679481.. 3682867
Download Sequence
A.thaliana
AGI-codeAT2G21790.1
Descriptionribonucleotide reductase 1
TAIR curator summaryencodes large subunit of ribonucleotide reductase involved in the production of deoxyribonucleoside triphosphates (dNTPs) for DNA replication and repair
Alias[ATRNR1][CLS8][DPD2][R1][RNR1][RIBONUCLEOTIDE REDUCTASE LARGE SUBUNIT 1][CRINKLY LEAVES 8][defective in pollen organelle DNA degradation 2][RIBONUCLEOTIDE REDUCTASE 1][ribonucleotide reductase 1]
Gene coexpression
MR
MR Locus Description
16 Ahg942094
17.3205 Ahg941700
25.5734 Ahg897511 Subtilase family protein
30.4795 Ahg494336 Ca2+ activated outward rectifying K+ channel 2
53.5724 Ahg487738 Pectin lyase-like superfamily protein
65.8787 Ahg315689
67.1416 Ahg896948 AGAMOUS-like 79
72.753 Ahg925916
80.1249 Ahg937833 Signal transduction histidine kinase
80.796 Ahg952099 casein lytic proteinase B2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression