| Annotation |
|---|
| Description | jgi|Araly1|949330|scaffold_801217.1 |
| Sequence |
TTTCACTTAC CTCACTCTTC TTCGTCATGG CGAACAATCC TTCGCAGCTT CTTCCATCAG AGCTAATCGA TAGGTGCATA GGATCGAAGA TATGGGTGAT TATGAAAGGA GATAAGGAGC TTGTTGGTAT TCTTAAAGGC TTCGATGTTT ATGTTAACAT GGTTCTTGAA GATGTCACCG AATATGAGAT TACAGCAGAA GGAAGACGGG TTACAAAGCT TGATCAAATT CTGCTCAATG GCAACAACAT CGCCATTCTC GTGCCAGGTG GGTCTCCCGA AGATGCAGAA TGAGGTTTGC AAGGGATGTT CAG |
| Length | 313 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 11604429.. 11605601 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G48870.1 |
| Description | Small nuclear ribonucleoprotein family protein |
| TAIR curator summary | SAD1 encodes a polypeptide similar to multifunctional Sm-like snRNP proteins that are required for mRNA splicing, export, and degradation. Mutation in this gene increases plant sensitivity to drought stress and ABA in seed germination, root growth, and the expression of some stress-responsive genes. |
| Alias | [AtLSM5][AtSAD1][LSM5][SAD1][SM-like 5][SUPERSENSITIVE TO ABA AND DROUGHT 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.09902 |
Ahg479356 | histone deacetylase 15 |
| 10.3923 |
Ahg494926 | Cyclin family protein |
| 12.8452 |
Ahg472398 | wound-responsive family protein |
| 16.7332 |
Ahg928711 | tubulin folding cofactor B |
| 32.4037 |
Ahg488541 | heat shock factor 3 |
| 36.0832 |
Ahg929946 | Ribosomal L18p/L5e family protein |
| 40.5956 |
Ahg473343 | zinc finger (C2H2 type) family protein |
| 42.4264 |
Ahg927583 | Mitochondrial ribosomal protein L37 |
| 50.1996 |
Ahg482617 | Family of unknown function (DUF662) |
| 50.7543 |
Ahg473323 | Arp2/3 complex, 34 kD subunit p34-Arc |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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