| Annotation |
|---|
| Description | jgi|Araly1|932732|scaffold_400720.1 |
| Sequence |
CAGCAGATGA GCACGTGATA ATGAGCTTGA GATTGCAAAG CCCTTTTCTT TCTACTCCTC TGCTTCAGAG TTCTTTCATT AGCAGAGAGA AGAGAATCAA TGTTACTAGA AGGGCGTTTC GTAGAAAGAG TATATCATCG GAGAAGATAC AGAATGATTG GTTAGCTAAA GTTGCCAAAT TTTCTCAGTT TTGTGGGAAA AATGTACAAT TGCTTAGGAA GTCTCTTGAT TCTAGAAGTA GAATGGAGGT TAAATGTTTG AAAGATCCTT TTTTACGAAG CAAGGGATTG GTTAGGGCTT TGGCTCCTGT TTGGGAAGAG GGTTTGTTTT TCTTGAGGTG TTCTGTTTTC TTTGCTGTTA TCTCTGGGGT TTGCTTGTTG GTGTGGTATG GACAAAATAA GGCTCGTGCT TTTGTTGAGA CTAAGCTTTT GCCATCAGTT TGCTCTGTGC TTAGTGAGAC TATTCAGCGT GAGGTTGATT TTGGAAAGGT TAGAAGAGTT TCACCATTGT GTATAACTCT TGAAGCGAGC TCTATTGGTC CTCATGGTGA AGAGTTTTCG TGTGGTGAAG TTCCGACTAT GAAACTTTGT GTCCGTCCTT TTGCTAGTCT TAGGAGGGGA AAGATTGTGG TTGATGCGAT TTTAAGTAAT CCAACAGTTT TGGTTGCACA AAAGAAAGAT TTTACATGGT TAGGGATACC TTTATCTGAC ACTACTTTGC CAAGCCATTT GTCCTCTGAA GAAGGGATTG ATTTTCGCAC CAAAACTCGG AGAATTTCAA GGGAGGAAGC TGGGATCCGT TGGGATGAAG AAAGGGATAA TGATGCAAGA AAAGCTGCAG AGATGGGCTA TATTGTTCCT TGTAAGAATT CTTCTCAAGT TAAAGATGTT GTGAAGCACG ATAGGCATTT TACTGAAATA GCAAATCCCA ACTCGTTTAT TTGCATGGAT GAAAAGATGC ATTTAGCAGA CCAACATTGC ATGGATCCAG GTGTTGATTA TGACGTGAAG CATGCTGAAT TGGAGAAACC ATTTGGCATA AAAATTCCTG GTTCAGGACT CAAGTTCTTG TCCAAAATTT TAAAGGTTCC GAGGAAGTAC AAATTTAAGT GGAATTCAAA ATCACACAAT AATTCAATGT CTGATATTAG TGCAAAGAAG CGAATTCTTG ATCGCAGTGC TTCAGCAGCT CTATCGTATT TCTACAGCCT ATCACAACAA AAGCCTGACG AGCCTTCAGT ATCATCCGCA GATTATGATG AGTTGAGTTT GGATATGCTA TTAGTTAAAG GTGAGAAAGA AACCAGTAAT CAATATGATA AGGAGAAAAG GTTCATCGCT GAGAAAAAGG CTTCAACGTT AGATAAGTTC ACTGTATCAT GTGATCCATT CCTTATGACT GTTGATAGAC TCTGTGCACT CTTACAAACT AAAGAAAGCT CATGTGTTGA AGATATTGTG AATTCTACTG AATCTGAGAC TTTAAGCAGT AAGAGAGGGG ATATATCTAG AAAGGTTGTG GGTGATGATG TTCCACATGG TAATCGAAGT CGAAATCAAC CTCGTGACTT CACTTTCAAA AAGCATGAGC ATCAACCTGT AGCAAATCAT TGGCGTCCTA CTTGGCCATG GAACATAAAA TTGAAGGAAC TGGTGTTTAA TATTCTAAGT GGTTCGTCTA AGAAGCTAAC AGGAGGGTCA GATCTGAATG CTGCTGACAA TGCTCTTCAC TTGAGTGATG GACTGGAGAA GCTGCCTGCT GTTTATGTTG AGAAGACACT ACCAGTTATG CTTGACTCTG TTCAGTTTAA AGGTGGGACA CTTATTCTAT TGGCTTATGG CGATACAGAG CCCAGAGAAA TGAGAAACGC CCATGGACAT GTTAAGTTTC AGAATCATTA TGGTCGTGTG TACGTGCAAC TTGGTGGAAA CTGTACCATG TGGAGATCAG ATGTAACATC TGAAGATGGT GGGCTTTTGT CTGTTGATGT TTTTGTTGAT ACTGTGGAGC AGAATTGGCA TGCAAATTTA AATGTCGCCA ACTTCTTTGT CCCGATTTTT GAAAGAATTC TAGAGATCCC AATCGAGTGG TCTACGGGAA GAGCTACTGG TGAGGTTCAT CTGTGTATGT CTAGAGGGGA AATATTTCCA AACCTTCATG GCCAGCTTGA TGTCACAGGA CTAGGCTTCC AAATATATGA TGCACCTTCC TCGTTTTCTG ATGTCTCGAC CAGCCTTTCT TTCCGCGGCC AGCGCATTTT CCTGCATAAT GCTAATGGTT GGTTTGGAAA GGTTCCTTTG GAGGCTTCTG GAGATTTCGG TATACATCCA GATGAGGGGG AGTTTCATCT GATGTGTCAG GTTCCCTATG TGGAAATTAA TGCTTTGATG AAAACGTTCA AGATGAAGCC CTTGTTTTTC CCGCTAGCTG GTTCTGTCAC AGCTGTATTC AACTGTCAAG GCCCGCTTGA TGCTCCCGTT TTTGTGGGAA GTTGCATGGT CTCTAGGAAG ATAGCTTATC TGTCTCCAGA TCTCCCTACA TCTTTGGCAT ATGAGGCAAT GCTTAAAAAC AAGGAAGCTG GTGCAGTTGC AGCATTTGAC CGTGTTCCAT TTTCTTATCT TTCTGCTAAT TTCACATTTA ACACTGACAA CTGTGTTGCT GATTTATATG GTATTAGAGC TACCCTTGTT GATGGTGGGG AGATTCGAGG AGCAGGGAAT GCTTGGATCT GTCCAGAGGG GGAGGTAGAT GATACCGCAC TGGATGTGAA CTTTTCAGGA AATATATCTT TTGATAAGGT TTTGGATCGT TATATGCCTG AATATCTAAA TCTCGGGTCA CTGAAGTTGG GTGATTTAAC TGGGGAAACA AAACTTTCTG GGGCCCTCTT GAAACCGAGG TTTGACATAA AATGGGCAGC CCCTAAAGCT GATGGCTCCT TGACTGATGC TCGGGGAGAT ATTGTGATAT CACATGATAA TATCATCGTT AATTCATCGT CCATTGCTTT TGATCTATAC TCAAAACTAG ATACCACATA CCGAGACCAG TGTTTGTCTA ACCAAGACTT CACTCAAGGG GAAGCCATGC CATTTGTTGT TGAGGGGCTT GATTTGGATT TACGTATGCG TGGTTTTGAG TTTTTCAGCT TGGTGTCTTC CTATCCATTT GATTCCCCAA GACCTACACA TTTAAAAGCA ACAGGAAGGA TCAAATTTCT TGGGAAGATA AAACGACACA GCACTACAAA AGATGGAGAG GTGGGGTCAG ACAAATGTGA AGATGCAGCT GCAATTTCTA GCCTCGATGG TGAAATTTCC ATCTCAAGTC TCAAGCTGAA TCAGTTGATT TTGGCCCCTC AACTATCTGG ACTGTTGAGC GTTTCACGTG ATCATGTTAA GCTTGATGCC GTGGGCCGGC CAGATGAAAG TCTTACACTA GACTTTATAG GTCCACTACA GCCTAATTCT GACGAAAATG TACAAAGTGG AAAGTTGCTC TCATTTTCTC TTCGAAAGGG GCAACTAAGA GCTAACGCAT GTTTTCAACC ACAACAGTCG GCTACTTTGG AGATACGCCA TTTTCCACTT GATGAGTTAG AGTTGGCCTC GCTGAGAGGA GTGATTCAAA GGGCAGAGAT TCAACTAAAT CTTCAGAAGC GAAGGGGACA TGGCCTGTTG TCTGTAATTC GGCCAAAATT TAGCGGGGTT CTAGGTGAAG CTTTAGATGT TGCAGTAAGA TGGAGCGGTG ATGTGATCAC AGTTGAGAAA ACTATTCTGG AACAAAGCAA TAGCCGGTAT GAGCTTCAAG GTGAATATGT ATTGCCGGGT TCCCGTGACC GAGATTTTGG TCAGAAGGAA GCTGGCAGTT TCTTAATGAG AGCCATGACG GGTCATCTAG GAAGTGTTAT ATCTTCCATG GGAAGATGGA GAATGAGACT TGAAGTGCCT AAGGCAGAGG TTGCTGAGAT GCTTCCTCTT GCAAGGCTTC TTTCAAGAAG TACAGATCCA GCTGTTCACT CAAGATCAAA GGATCTTTTC ATTCAAAGCG TGCAAAATCT CTGTCTACAA GCTGAAAATC TTCGAGACTT ACTTGAGGAG ATACGTGGGT ATTATACTCC ACCAAGTGAA GTCGTTCTTG AAGATCCAAG TCTTCCAGGT TTAGCTGAAC TCAAAGGTCA TTGGCATGGT TCGCTGGATG CTAGTGGTGG AGGCAATGGA GACACCTTGG CCGAATTTGA CTTCCATGGT GATGATTGGG AGTGGGGGAC TTACAAAACA CAGCGTGTTC TGGCTACTGG TTCATATAGC AATGATGATG GTTTACGTCT TAAGGAGATG CTTATTCAAA AAGGAAACGC TACACTGCAT GCAGATGGGA CCTTATTGGG GCCAAAAACA AATCTTCATT TTGCTGTTCT AAATTTTCCT GTTAGTTTGA TACCTACCCT GATTGAGGTT GTTGAATCAT CAGCTTCTGA TCTTGTTCAC TCTTTGAGGA AACTCTTGTC ACCAATCAAA GGCATTTTGC ACATGGAGGG AGATCTTAGA GGGAGTCTTG AAAAACCAGA ATGTGATGTA CAAGTTAGAT TATTGGATGG TGCTGTTGGT GGTATAGACC TTGGACGAGC TGAAGTTTTT GCTTCTCTTA CATCAAACAG TCGCTTTCTT TTCAATTCCA ATTTTGAACC ATTTGTCCAA AATGGTCATG TGCACATACA AGGAAGTGTT CCTGTTAGCT TTTCGCAGAA AAATATCTCT GAGGGAGAAG ACAGGGAAAC TGATAGAGGT GGTGCAGTAA AAGTCCCTAG CTGGGCAAAA GAAAAGGAAG ATGATGAGAA GAGAACCTCA AGGGATAGGG GCGAAGAGGG ATGGGATAGC CAACTAGCTG AGAGTCTCAA GGGTTTGAAC TGGAATATTT TAGATGAAGG AGTAGTTAGA TTGGAGGCAG ACATCAAGGA TGGGGGAATG ACTTTGTTAA CAGCCATATC TCCTTATGCT AATTGGCTCC AAGGAAATGC TGATATCAGG CTTCAGGTCG GAGGTACAGT AGAGCATCCA GTGCTTGATG GGTCTGCTTC ATTCCACAGG GCGTCTATCT CTTCACCTGT GCTCCGTAAA CCTCTCACAA ACTTTGGTGG AACCTTACAT GTTAAATCAA ACAGGTTGTG CATCACCTCA CTGGAAAGCA GGGTAAGTAG AAGAGGAAAG CTGGTTGTGA AAGGAAATCT TCCCCTTAGA TCAAATGAAG CATCTACTGG TGATGGAATA GATCTCAAAT GTGAAGTTCT TGAAGTACGA GCAAAGAATT TCTTAAGTGG TCAGGTTGAT ACTCAGCTGC AAATTACTGG ATCAATGTTG CAGCCAACTA TATCAGGAAA TATTAAATTA AGCCAAGGAG AAGCTTATTT GCCTCATGAT AAGGGTGGGG GAGCTGCCCC ACTCAATAGA CTGGCAGCCA ATCAATATAG GATTCCAGGT GCTGCTATTA ATCAAGCAGT TTCTTCACGA TATTTTGCTC GATTTTTTGG CACAGAACGG GCTTCTTCAA GGATGAAATT CTCCCAGTCT TCTGGTGAAT CAAATGCTGT TGAAAAGGAG ATTGACGAAG TGAAAATGAA ACCAAATATG GATATCCGTC TGAGTGATAT GAAACTTGTT TTAGGACCAG AGTTGAGGAT AGTGTATCCT TTAATTCTTA ATTTTGCTGT TAGTGGTGAG CTTGAGCTTG ATGGCATGGC TCATCCCAAA TATATCAAAC CAAAGGGTAT CCTGATGTTC GAGAATGGAG ATGTCAATCT TGTGGCTACT CAGGTACGTC TGAAGAGGGA GCATCTCAAC ATTGCAAAGT TTGAGCCTGA ACATGGACTA GATCCTCTGC TAGATTTAGC TTTAGTTGGT TCAGAATGGC AATTTAGGGT CCAAAGTCGT GCCAGCAATT GGCAGGAAAA ACTTGTGGTG ACTTCAACTC GTTCTGTGGA ACAGGATGCT CTCTCACCTT CCGAGGCTGC AAAGGTTTTC GAGAGCCAAT TAGCAGAATC CATATTAGAA GGAGATGGAC AACTTGCTTT CAAAAAACTT GCAACCGCAA CACTTGAAAC CATAATGCCA AGGATAGAAG GGAAAGGAGA GTTTGGTCAA GCAAGATGGA GGTTGGTGTA CGCCCCACAG ATCCCAAGTT TACTCTCTGT TGATCCAACT GTTGATCCTC TCAAGTCTCT GGCGAGCAAC ATCTCGTTTG GAACAGAAGT TGAAGTGCAG CTCGGAAAAC GTCTTCAGGC CTCTGTGGTA AGACAAATGA AAGACTCTGA GATGGCAATG CAATGGACAC TGATCTATCA ACTCACGAGC CGCTTGCGTG TCCTTCTGCA ATCTGCACCT TCCAAACGTT TGCTTTTTGA ATACTCTGCT ACATCACAAG ACTAAACCTT CAAAGCCTGT TTGTT |
| Length | 6445 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 4410832.. 4421837 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G25660.1 |
| Description | embryo defective 2410 |
| TAIR curator summary | |
| Alias | [emb2410][embryo defective 2410] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 10.4881 |
Ahg478409 | alpha-L-arabinofuranosidase 1 |
| 19.5959 |
Ahg487168 | Iron-sulphur cluster biosynthesis family protein |
| 24 |
Ahg490494 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 28.4253 |
Ahg916552 | |
| 29.5635 |
Ahg491670 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 29.7993 |
Ahg480532 | |
| 31.749 |
Ahg495211 | PLAC8 family protein |
| 38.6005 |
Ahg918952 | tetratricopeptide repeat (TPR)-containing protein |
| 42.7785 |
Ahg898458 | Cleavage and polyadenylation specificity factor (CPSF) A subunit protein |
| 45.3982 |
Ahg888770 | F-box family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|