Detail



ID : Ahg934020

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|934020|scaffold_402008.1
Sequence
TTTTGAACCC CCTGAGGTAC GATGATGACG AAGAGTTCAG AGGAAAGTGA CGCCAGTAAA ACAATAAAGA AGATCGTCGA TGCAGCCGAA CTTGCCAGAG ACTTGTTGCA AATTCAAGAA CACATTAAGG CTTTGGAATT AACCGAGAAA ACGATTTCTG ATCATGGGAA TCACGAAAGT TGCTTTTTTC ATCACGAACT GCAAGGTGAT ATCTTTTTTG TGCTAGCCAC AGAAACAGAT AACACTGACG TCAAATGCGT ATACTTGTTT ACTTCTGTCG ATGCATATTC AATGGCTACT CTTCTGTGTC CTGACGCTTT GAGGTCCTTT CGTGGCTATG CTCGTTCGAT GATCCAGTTG GGTAATCAGC TTCGGATAAA CCAGTTTTAC AAGAAAGCTG TGACCAAAGC AAAACGGGGA TTGTTAGTAA CGCAACCTCA AGGACCGTAT ATGTCCCTAG TAGGCTATAT TGTAGCCTTG GAGGCAGAAC TTCAGAATTT GATAGATCTT GCAACAAAAA AGATGCATGC GGCTGTGACT GTTTCTGATA CAGGTACTAT GGCTAATCAG ATTGCAACGA TAGAGAAAGA TCCTTCTTTT GATCGATTGA AGAACTTTTG GGTTAATCTG GATGACAAGA CCAAAAGAGA ATTTTTGGTA GTAGACTCTA GAAAGCTTAT AGACTATGTA GAGAATAAGT ATGGTAACAA AGTGAAAGAA GATTTTGGGA AATGTGTATC CGTTGCCAAT AATCTTCCAT GGAGAGGATG GAAGTGCCAC ATTTGTTCTC AGGTAAACTA CAGTTTTACA GATTGCCAGA GGCACATCTT AGATAACCAT GTGCAAAATT TTGTACCCGA TCCCAGTGGT CGTCCTAAGT GTGTAGATAA GGTTTTGGCT GACATGATAT GTTGTGGAAA ATGGGATGAT TGGCCTGAAG TGAAGGATGA AGAGCGAAGG AAAATACTCA AACAGTTTGC TCAGGTTCTT AAATCTTCTT TCTGTAATGA CAATGATACT CTTTCATGTA CCCTTTGGGA CTGGTTGATA GATTACACAG AAAGGAATCT GCAACTACTG GAAGTTCCTG GGAGCTATCT TGATAAATGT GGCTTCTTTA AGAACCCTCA GTGCATCTGC TTCTTAGATC TTAAGCACCT TGAACACATC CTCAAATATT TTAGACAGCT CACCACAGAT GTTCGCGCGA GTTTAGTTCC AAAAGTAGTG AATTGTTTCT GGAAAAACTC ACGGGTCAAG GAAACAATCG GTCTTGAGAG ACTTACATTT AATCTGCTTC TGGATGGGAG ACTGCTGTGT GAAGAAGAGC TTGAATCAGA TAAGATAGGG ACAGTAGAGC ATTATAAATC CACTGCAATT TATGAGGATG TGATGCCTAA GGGTGATAAG ATCGTCTCTT GGATTCTTGA CTGCCCAGAA ATCGATCTGG AATTTGTGTC TCAAATGGCA AACGGCTTAC ACAATCGTGA GATATGGTTA GCAGCTTTGA GAATAGTACG AGGCATGGTT AGGAACAAGG AAAGCTACTA TGATAAGAGA CACAAGATGC TAACCTATGA GAAGATGTTG TGTGAGGCAG AGACCATTTG TGACAGAGAA GACACTAGAA AGAATGTTAA TCAGCGGAGC ACATATGAGT TTGCACTTCG AATGAAATGT GAGGAGCTTG TAGGTAAGCA AGATGATGAT ACAAAATGTT TCTTGACTGT TGTAAGAGAT GTTTTTCAAA GAAAAAGCTC TCCAAGTTTT GAAGTATCAG AAGATAAGGA GGAGTGTATA TCCAAACTCT CTACTACTGT CCCAAATGAT GATGTTAAGA AAAGTCTGTG GACGCTAAAG AAATCTCTGA AGAAGAAGTT CCCTTTGATT GATTCGAAGA TTTTGCGGAA CAAGTCTGCG TACAAAAAGC TAATATATGT ATTCCCAAAG CTATCAGCAG TTGAGTATCG CTTGGTGGTC CTTCCGTTCG TGAAGAAGTT CTTACAGGAT AAACTGAAGA AAATGATGAA AACAAATAGC AGTTCAGTTG CTGCAGGCGG TTCTGCTGAA CGAAAACCTA AGAAGAGACA TCTTTCAAAT GAGGTAAAAG ACTTAATCAA TCCTGTTAGC ACTTATTGTT TTGCTGTTGT TTGTTTTGAG TTAAAGTGAG TTATGCAATT GACGCAGGG 
Length2189
Protein Sequence
Protein Residue
Map Locationscaffold_4: 15403495.. 15405448
Download Sequence
A.thaliana
AGI-codeAT2G34220.1
DescriptionProtein with domains of unknown function (DUF627 and DUF629)
TAIR curator summary
Alias[MEE20][maternal effect embryo arrest 20]
Gene coexpression
MR
MR Locus Description
19.7484 Ahg919651 nuclear factor Y, subunit B4
46.6369 Ahg948369 GDSL-like Lipase/Acylhydrolase superfamily protein
58.7367 Ahg345126
69.1954 Ahg929099 myb domain protein 5
70.3776 Ahg344061 SU(VAR)3-9 homolog 7
74.98 Ahg951548 F-box family protein with a domain of unknown function (DUF295)
88.2213 Ahg489725 Major facilitator superfamily protein
88.9382 Ahg492081 seed storage albumin 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression