Detail



ID : Ahg934024

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|934024|scaffold_402012.1
Sequence
TAAGATTTTC GCTGGTAGTG ATGGAGATCG ATTTGGGAGC GAACGCGTTC GGTATCGACT TCCATCCATC GACGAATCTA ATAGCTGCTG GTCTCATCGA TGGCCACTTG CATCTATACC GATACGACTC AGATTCCTCA CTTGTCAGGG AACGTAAAGT TCGAGCCCAT AAGGAGTCTT GTAGAGCTGT TCGGTTCATT GATGATGGCC AAAGAATCGT CACAGCTTCA GCTGATTGCT CAATTCTAGC CACTGATGTA GAGACTGGTG CTAAGGTTGC ACATCTTGAG AATGCTCACG AGGATGCTGT TAATACTTTG ATTAATGTTA CTGAGACAAC TATCGCTTCA GGAGATGATA AAGGCTGCGT TAAGGTTTGG GATACAAGAC AGCGCTCTTG CTCTCATGAG TTTAATGCAC ACGAGGATTA CATTTCTGGC ATGACCTTTG CGTCTGATTC AATGAAGCTA GTGTGGAGAC GGTACCCTGT CTGTCTGTAT CTCAGACAAA GTAAGGTGCA ATCTCAGTCT GATTTTCTGA AGACGAACTA CTTTCTGTTA AAAAATGGCC GTAAAGTTAT TTGTGGAACT CAGAATGGTA CTCTCTTGTT GTATTCATGG GGATTTTTCA AGGATTGCAG CGATCGGTTT GTTGATCTAG CTCCAAATTC AGTTGATACT CTATTGAAGC TCGATGAGGA CAGACTTATC ACTGGGTGTG ATAATGGAAT ACTTAGCCTT GTTGGAATAC TGCCCAACAG AATCATACAG CCAATAGGGG CACACGACTA CCCTATCGAA GATCTCGCTC TCTCGCATGA TAACAAATTT CTCGGTAGCA CAGCTCATGA CAGTATGCTG AAGCTGTGGA ACCTAGAAGA GATTCTAGAA GGTTCTAATG GCAACTCGGG GAATGCATCT GGAGCTGCAG GAGACAGTGA CAGTGACAAG GATGGGATGG ACCTTGACAA TGATTCTCAC AAGTCTTCCA AAGGCAGCAA GAGGAAAACA AAAAGTAAAC CGAATACGCT CAACTCTACA AATAATTTCT TTGCAGACTT ATAGATTTTG TTTCAGTTTC AGTCT 
Length1085
Protein Sequence
Protein Residue
Map Locationscaffold_4: 15417986.. 15420529
Download Sequence
A.thaliana
AGI-codeAT2G34260.1
Descriptiontransducin family protein / WD-40 repeat family protein
TAIR curator summary
Alias[WDR55][human WDR55 (WD40 repeat) homolog]
Gene coexpression
MR
MR Locus Description
4 Ahg899275 Pentatricopeptide repeat (PPR) superfamily protein
19.5704 Ahg313639 nuclear RNA polymerase A2
24.5561 Ahg923882 Pentatricopeptide repeat (PPR) superfamily protein
32.9242 Ahg478388 Transducin/WD40 repeat-like superfamily protein
45.4643 Ahg346595
49.5076 Ahg940355 DEA(D/H)-box RNA helicase family protein
57.8619 Ahg478974
65.9242 Ahg924612 Tetratricopeptide repeat (TPR)-like superfamily protein
69.0507 Ahg480841 Transducin/WD40 repeat-like superfamily protein
69.6419 Ahg894546 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression