| Annotation |
|---|
| Description | jgi|Araly1|934126|scaffold_402114.1 |
| Sequence |
TTGAGTAGGA ATTGGACAAC ATGGTACATT CAGAGTCATC AAAGCTCATT TCGTTGCGCG GTGGTAGTGG TCCTTTTTCT AAGGATGAAC TAGCAACAAA TGGTAGTTAT ACCGATCCTA TGGGGCGGAG GAAGTCCAAG CGGTTTAAGC TTGCAGCGGA AAGTGAGTTT TCACCTGATT GTGGATCGGG TTCCATGCGG CTCAGATCGA GAACTATACA GAAGGAGCTC CAAATTGAGA CTTGCGAGAA CAGGAATGCT TCTGAAGTTG AGGTTGAGTT GATTCCTGGA GAAAAAGTGG CAGATCGAGA TGGCTTTAAA TCCGTTGATT GTAATGACAT GTCGGCTGGA GTAACCGAAG GAGCTAAATC TCTTCGAGTT AATATGCAAG AACCAATGGA AGGTAGGAAT CTGCCAGAGA ATACAAGTGA GCAAAATTTG GTGGAGGTCC ATCTTCCAAG CATAAGCCTG CCAGAAGAAG ATGTGATGGG GTCTGTTTGC AGGAAAAGTA TCACCGGGAC AAAGGAGCTT CGCGGAAGAA CGATTTCTGT AGTGAGAGAC TTATCTCCAA ATATGGGGAA CAAGTTTTCA AAGAGTGGAA AGACCGCTAA AGGTTCTATA TCGATGGAAG AGGATAACTT GGTTCTGGAA AAGTCAGATT CTGGAGATCA TTTGGGTCAA TCTCTTTCTA AAAGCATATC ACCAGAGGTT TTGGAACTTG ATAAATCAAA GGTTACTGTT CCAAAACCAA TTGAGGCTGC TGTTAGGATA ATTACAAACA AAGGGGTTGC AATGCCTCCA CCCTTGAAGC CTTCCGAGAA GACCAATGGA GATTATGGTG AAGGATCTAT GAGGAAGAAT AGTGAGAGGG TTGCCCCGGA TAAAAAGAGA TTAGCTCGTA ATCCTCGGTT ATCAAATGGT GGGCTTCCTA GTGGCTCAAG CAGTGGGGAT AGTGCTCGGT ACAAAGTTAA GGAAACTCTG CGTCTTTTCC ATGAAACTTG TAAAAAAATT ATGCAGGAGG AAGAAGCAAG GCCTAGGAAA AGAGATGGTA GCAAGTTCAG AGTGGATAAC GAGGCTTCGA AAATTCTCAA GAGTAAAGGG AAAAATCTTA ACAGTGGTAC TCAGATTATT GGAACCGTGC CTGGTGTTGA GGTTGGCGAT GAATTTCAAT ATAGAATGGA GCTGAACTTT CTTGGTATAC ATAGACCAAG TCAAAGTGGT ATCGATTATA TGAAAGATGA CGGCGAGGAA CTAGTTGCCA CGAGTATTGT ATCCTCTGGA GGTTATGATG ACGTGGTTGA TAACTCGGAT GTCTTGATCT ACACGGGTCA AGGCGGAAAT GTGGGGAAAA AGGGAAAGAA AAATAATGAA CCCAAAGACC AACAGCTTGT AACGGGAAAC CTTGCGTTGA AAAACAGTAT ACACAAAAAG AACCCTGTGC GGGTCATAAG AGGCATTAAA AATACGACAC TACAATCATC AGCTGTTGCA AAGAATTATG TTTACGATGG ATTGTATCTG GTGGAAGAGT ACTGGGAAGA AACTGGGTCT CATGGTAAGC TCGTCTTCAA GTTCAAACTG CGGCGTATTC CTGGACAACC CGAGCTTCCC TGGAAAGTGG TTGAGAAATC AAAGAAATCC GAGTTGCGGG ACGGTCTTTG CAATGTTGAT ATCTCAGAAG GGAAAGAGAC ATTACCCATA TGCGCTGTGA ACAATATAGA TGATGAGAAA CCACCTCCGT TTATCTACAC GGTTAAAATG ATATATCCGG ATTGGTGCCG GCCAATTCCT CCAAAGAGCT GTGGTTGCAC AAAACGCTGC TCCGAATCAA AAAAGTGTGC CTGCGTTGTG AAAAACGGTG GAGAGATACC GTACAATTAT GATGGAGCCA TTGTTAGTAT AAAGCCCCTG GTCTATGAGT GTGGCCCACA CTGCAAATGC CCACCTTCTT GCTACATGAG AGTCTCACAG CACGGGATCA AGATCAAGCT GGAGATCTTC AAAACGGAGT CAAGAGGATG GGGAGTGAGA TCGCTGGAAT CTATTCCTAT CGGAAGCTTT ATCTGTGAGT ACGCAGGAGA TCTTCTAGAG GATAAACAAG CAGAAAGACT TACCGGGAAA GATGAGTATC TCTTTGAACT CGGGGAGGAG GAGGATCAGT TCACCATAGA CGCAGCACGG AAAGGGAACA TAGGGAGGTT TATAAACCAT AGCTGCTCAC CGAATCTGTA CGCACAGGAC GTATTGTACG ACCATGAGGA CACAAGAATA CCTCACATTA TGTTCTTTGC ACTGGACCAT ATACCTCCAC TTGAGGAACT CTCATACGAC TACAATTATA AGATCGATCA GGTAACCGAC TCTAATGGTA ATATCAAGAA GAAAATTTGC TACTGTGGTT CCGCTGAGTG TAGTGGTAGG CTCTACTAAG TAAGCTGTTG TTACCCCTT |
| Length | 2449 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 15833258.. 15835705 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G35160.1 |
| Description | SU(VAR)3-9 homolog 5 |
| TAIR curator summary | Encodes SU(var)3-9 homologue 5 (SUVH5). SUVH5 has histone methyltransferase (MTase) activity in vitro and contributes to the maintenance of H3 mK9 (methylation of histone H3 at Lys-9) and CMT3-mediated non-CG methylation in vivo. This is a member of a subfamily of SET proteins that shares a conserved SRA domain. |
| Alias | [SGD9][SUVH5][SET DOMAIN-CONTAINING PROTEIN 9][SU(VAR)3-9 homolog 5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 21.3542 |
Ahg477950 | HCO3- transporter family |
| 23.0868 |
Ahg474258 | ABC-2 type transporter family protein |
| 37.2559 |
Ahg343889 | Leucine-rich repeat protein kinase family protein |
| 41.1218 |
Ahg486423 | Ypt/Rab-GAP domain of gyp1p superfamily protein |
| 41.5692 |
Ahg495427 | Transducin/WD40 repeat-like superfamily protein |
| 41.833 |
Ahg485823 | TRICHOME BIREFRINGENCE-LIKE 36 |
| 42.7551 |
Ahg902707 | laccase 6 |
| 47.244 |
Ahg332090 | C-terminal domain phosphatase-like 4 |
| 48.6004 |
Ahg475423 | conserved peptide upstream open reading frame 45 |
| 49.4773 |
Ahg488348 | Phosphoglycerate mutase-like family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|