Detail



ID : Ahg948334

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|948334|scaffold_800221.1
Sequence
TTGGTGAAGT AATCGAGAGG GGACAATGAT GGAAGTGGAA GGATCGATGA ATCGTGCTCC TGATCAATCA TCCTTCTTAC GATCGAGACG ATCCAAAGCT CTGTATCAGT TTAAGCAGCA GAAACTCCCA GCTTGTAAGC CAGTCTTAAC ACCAATATCG GTTATAACAG TGTTTATGTT AATGGGTTTT GTTTTCATTC CCATTGGTCT CATTACTCTT CGTGCTTCTC GTAATGCTAT TGAAATTATA GACCGGTATG ATGTTGAGTG CATTCCTGAA GAATATAGAA CCAACAAACT GTCGTACATA ACAGATTCAT CTATCCCAAA GAATTGTACT CGTTACTTGA AGGTACAAAA GTATATGAAA GCTCCCATTT TTATCTACTA CCAGCTCGAT AACTACTATC AAAACCATCG CCGGTATGTA AAGAGTAGAA GTGATCAGCA ACTTTTACAT GGACTGGAGT ATAGCCACAC AAGTTCTTGT GAACCCGAGG AGTCATCTAA TGGTCTCCCG ATTGTTCCTT GTGGGTTAAT CGCTTGGAGT ATGTTCAATG ATACATTTAC GTTTTCTCGT GAAAGAACGA AACTGAAGGT GAGTCGGAAT AACATTGCGT GGAAGAGTGA CCGCGAGGAA AAGTTTGGAA AGAATGTGTA TCCTTTTAAT TTCCAGAATG GAACTTTGAT TGGTGGAGCA AAGTTGGATC CAAAAATTCC ACTAAGTGAC CAAGAGGATT TTATAGTGTG GATGCGAGCA GCTGCTTTGC TAAGCTTCCG GAAGTTATAT GGAAGAATCG AAGAGGACTT GGAACCAGGA ACCGTTGTTG AAGTAAATTT GATGAACAAT TACAACACTT ATAGCTTTAG TGGGCAGAAG AAGCTTATTC TTTCCACATC AAATTGGTTA GGAGGAAGAA ATGATTTCCT AGGCATCACC TATCTTGTTG TTGGTTCCTC TTCCATAGTC ATATCCATCA TCTTCATGTT GCTCCATTTG AAAAATCCAA GGCCTTACGG GGACAATTCG TGGAACAAGA AAAGCCTTTC AAGTTGAGAA GCTGTTACAT TCTTTCT 
Length1077
Protein Sequence
Protein Residue
Map Locationscaffold_8: 1130856.. 1132597
Download Sequence
A.thaliana
AGI-codeAT5G46150.2
DescriptionLEM3 (ligand-effect modulator 3) family protein / CDC50 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.79583 Ahg926625 hydroxyproline-rich glycoprotein family protein
33.3467 Ahg924037 Galactose oxidase/kelch repeat superfamily protein
35.7771 Ahg934335 TSL-kinase interacting protein 1
37.1214 Ahg488376 Pentatricopeptide repeat (PPR) superfamily protein
42.638 Ahg481464 Protein of unknown function (DUF778)
43.5086 Ahg322489 P-loop containing nucleoside triphosphate hydrolases superfamily protein
47.1487 Ahg942164 Protein of unknown function (DUF1677)
50.1996 Ahg475737 Signal transduction histidine kinase, hybrid-type, ethylene sensor
55.1543 Ahg494224 RGPR-related
59.8498 Ahg898458 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression