Detail



ID : Ahg934677

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|934677|scaffold_402665.1
Sequence
CTCTTTTCTA CAAGCTGAGA AAAAAATGAG TACTTTCGTG GCTTCCAAAC GATTCCGTCC ACCTCTTTTT CTCCATCGTT TGATAAACCC TAAACCCATT TCTTCACAGT ATCGATTTCT CCATCCACCG GATAATCAAA GTCGAGACAT TTCCGATTCT ACCACTGAAG TCTTCTCAGA ACTAGAATTT CCTCATAAAG CCTCTGGACC AAATCATTCA CCTTTAATTT CAACCTCTGA GACTGACAAT CATGTGGACG ACGCTCATGT AATCGAAGTG CTTCTAGGTC GTAGAAACGA CCCAGTCTCA GCTCTTCAAT ACTGCAATTG GGTCAAGCCT TTACGTAGTC TCTGTGAAGG TGGAGATGTC TTCTGGGTAC TCATTCATAT TCTCTTTAGC TCTCCTCACA CTCACGATCG TGCCAGCAAT TTGCTCGTAA TGTTCGTTTC AAGCAATCCA ACGCTAATTC CAAGCGCAAT GGTTAACAAT TTGGTTGATT CGTCTAAAAG GTTTGATTTT GAACTTAGCT CACGAGCTTT CAATTACTTG TTGAATGCTT ATATTCGAAA TAGGCGAATG GATTATGCTG TAGATTGCTT TAATTTGATG GTGGATCGAA ATGTGGTTCC TTTTGTTCCA TATGTGAACA ATGTTTTAAG CTCTTTAGTT CGAAGTAATT TGATAGATGA AGCTAAGGAG ATTTATAATA AGATGGTTTT GATTGGTGTT GCTGGTGATA ATGTTACGAC GCAGTTGTTG ATGCGAGCTA GTTTGAGAGA GCGAAAGCCC GAAGAGGCTG TGAAAATTTT CAGAAGAGTT ATGAGTAGAG GAGCAGAACC AGATGGTTTG TTGTTTAGTC TTGCTGTTCA AGCTGCTTGT AAGATGAAGG ATTTGGTTAT GGCTTTGGAT TTGTTGAGAG AAATGAGGGA GAAGGGAGGT GTCCCGGCCT CGCAGGAAAC GTATACTAGT GTGATTGTGG CTTGTGTGAA GGAAGGTAAT ATGGAGGAGG CGGTGAAGGT TAAGGATGAG ATGGTTGGTT TTGGGATACC GATGAGTGTT ATTGCTGCAA CGAGTTTGAT TACTGGATTT TGCAATGGGA ATGAGTTGGG TAAGGCTTTG GATTTCTTTA ATAGAATGGA GGAGGAAGGG CTGGCTCCGG ACAAAGTTAT GTTTTCGGTT ATGATCGAAT GGTTTTGTAA GAATATGGAG ATGGAGAAAG CTGTTGAGAT TTACAAGCGG ATGAAATCTG TAGGGATTGC TCCTTCATCT GTTCTTGTCC ACACAATGAT CCAAGGATGT TTGAAAGCTG AGTCACCAGA AGCGGCGCTA GAAATCTTTA ACGACAGTTT TGAAACCTGG ATTGCGCACG GTTTCATGTG TAACAAGATT TTCTTATTGT TATGCAAGCA AGGTAAGGTC GATGCTGCGA CAAGCTTTTT GAGGATGATG GAAAACAAAG GGATTGAGCC GAATGTAGTT TTTTACAATA ACATGATGCT TGCTCATTGC AGAATGAAAA ACATGGACTT GGCTCGTTCA ATATTTTCGG AAATGCTGGA AAAGGGTCTA CAACCGAATA ACTTCACTTA TTCCATCTTG ATTGATGGAT TTTTCAAGAA TCAAGATGAA CAGAATGCTT GGGAAGTCAT CAATCAGATG ATTGCTTCCA ATTTCGAAGC TAATGAAGTC ATATATAATA CGATCATCAA TGGTTTGTGC AAAGTTGGTC AGACATTTAA AGCCAAAGAG ATGTTGCAAA ATTTGATAAA AGAAAAGCGC TATTCCATGG GTTGCACGAG TTACAATAGC ATTATAGATG GATTTTTCAA AGAAGGTGAC ACCGATTCTG CTGTAGAAGC TTACAGAGAG ATGAGTGAAA ACGGTATATC CCCAAATGTT GTAACCTTCA CCAGCTTGAT CAATGGATTC TGCAAAAGTA ACAGAATGGA TCTAGCTCTT GAAATGATAC ACGAAATGAA AAGCAAGGAT TTGAAACTTG ATGTTCCAGC CTACGGTGCA CTAATAGACG GGTTCTGTAA AAAGCATGAC ATGAAAACCG CATATACTCT GTTCTCTGAA CTGCTGGAAC TAGGATTGAT GCCAAATGTG TCTGTCTACA ATAATTTGAT TTCAGGATTC CGTAATCTGG GAAAGATGGA TGCAGCAATT GACTTGTACA AGAAAATGGT GAATGACGGG ATAAGTTGTG ATCTGTTTAC ATATACAACG ATGATCGATG GGTTGTTAAA AGACGGAAAT CTAATTCTTG CCTCTGATTT GTACTCGGAG TTGCTTGCTT TGGGTATTGT CCCTGATGAA ATTCTGTACG TGGTACTTGT CAACGGTCTT AGTAAGAAGG GACAGTTTGT GAGAGCAAGC AAGATGTTAG AGGAGATGAA GAAGAAAGAT GCGACTCCAA ATGTGCTTAT ATACAGTACT GTTATCGCAG GACATCACAG AGAAGGAAAT CTCAATGAGG CTTTTAGACT TCATGATGAG ATGCTTGAGA AAGGTCTTGT ACATGATGAT ACTATATTCA ATTTACTCGT GAGTGGAAGA GTTGAGAAAC CTCCTGCTGC AGCCAAGATT AGTAGCTTGG CTTCTCCTGA GATGAGATCG AGCTACTAAA AAATAAATGT TTCTCAAGCC TTAT 
Length2654
Protein Sequence
Protein Residue
Map Locationscaffold_4: 18068324.. 18070379
Download Sequence
A.thaliana
AGI-codeAT2G39230.1
DescriptionLATERAL ORGAN JUNCTION
TAIR curator summaryEncodes a pentatricopeptide protein (LOJ) that is specifically expressed in lateral organ junctions.
Alias[LOJ][LATERAL ORGAN JUNCTION]
Gene coexpression
MR
MR Locus Description
14 Ahg330836 Leucine-rich repeat protein kinase family protein
56.7715 Ahg907782
87.2697 Ahg924765 PA-domain containing subtilase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression