Detail



ID : Ahg937226

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|937226|scaffold_501417.1
Sequence
ATCTGATCTT TGCAAACAAT ATGTCACGTA TACGAAAACG ATTGGCGTCG ATCTTTCCGA CTTTTGGGGT CGGAAATATG ATCAGATATG CTTATAAACT AGCAAGGGAA GCAATAGTTT CTGATATTAG CAGGCTTGTG AATCGTCCTC GCCAAGCCAA GGCTACCCTC AAAGGGACTT GCAGTATCTG TTTAGATGAT GATATTAATG CTAATCAGAT GTTTTCCATT AATAAATGTC GTCATCAATT CTGTTACGAG TGTATGAAAC GACATATAGA GGTGAGGCTA CTCGAGGGGA GTGTGATTAG TTGTCCTCAT TACAGCTGCA AGTCTAAGCT GAGTTTTGGA AACTGTGTCA ATCTTTTGTC ACCTAAACTA AGAAAGATGT GGCAACAAAG GATCAAAGAG GACTCTATTC CTGTTAAACA GAGAATTTAT TGTCCAAACC GGACGTGCTC CGCTCTAATG TCGGTAAACG AGCTCTCTAA ATCTACTAAA GAAGCTGGAG TTAGGAGATA CTTTTCTAGA TCTACTAAAG AAGCTAGAGT TAGAAGATAC TGCTTGGAAT GCGGTCAAGT CTTTTGCATC AACTGTAAAG TTAGATGGCA TAGTAACTTG TCGTGCCACG ATTACAAGAG ACTGGGTCCA AATCCTACTG CTGATGATAT AAAGCTTAAA GTTTTAGCAA ATCAGAAAAG GTGGCGTCAA TGTGAAAAGT GCAAACACAT GATCGAACTT TCGGAAGGAT GCATCAAAGT AACCTGCAGA TGTGGACATA AGTTTTGCTA CGAATGTGGA GCCAAGGCTG GAGGTTGCCG TCATGCTCTT TTCCATATGT ATCTCCCAAT GCAACAACAG TCCCCGTTAC CACCGAGGCC ACCACTTTTG CCATTACTGC AGAGGCCACC ACTTTTGCCA TTACCGCCCA TGGCGCATCC ACCAGTGTGG CTTACCATCT TGTGCTTTGT TCTCATTTGT TACTTATTTT ATATTTTTTT GGCTTCATAA AATAGTATGA TCGATTTTGT 
Length1030
Protein Sequence
Protein Residue
Map Locationscaffold_5: 11456404.. 11457502
Download Sequence
A.thaliana
AGI-codeAT3G45540.1
DescriptionRING/U-box protein with C6HC-type zinc finger
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
24.8193 Ahg940379
30.6594 Ahg923015
34.4384 Ahg493853 Exostosin family protein
34.7275 Ahg911831
36.1801 Ahg900378
42.4028 Ahg942059 Domain of unknown function (DUF2431)
45.9239 Ahg322168 expansin B2
48.3322 Ahg949435
55.8032 Ahg488438 TRICHOME BIREFRINGENCE-LIKE 19
64.9461 Ahg951015
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression