Detail


ID : Ahg322168

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|322168|fgenesh1_pm.C_scaffold_4002225
Sequence
ATGGCTATTC TTTTCGTAGA GCGATATTAC ATGATCATGA ACTTACTCTT TGCTCTAACT TGTCTCCTGT TAAACTTAAC TCATTGCTTT AGCCCCAAGA AACTCAACAT TTCAGCCGCC ACGACCAGTG ATTCTGATTG GTCTATTGCC GGAGCTACGT GGTATGGCAG CCCCACCGGA TACGGAAGCG ACGGTGGAGC TTGTGGTTAT GGAACTGCCG TGGCACAACC TCCGTTTTCG AGCATGGTAT CAGCAGGCGG TACGTCGTTG TTCAAGTCAG GGAAAGGATG TGGCGCATGT TACCAGATAA AATGCACTTC GAAATCTGCA TGTTCGAAAA ATCCTGTTAC GATAGTCATC ACAGATGAAT GTCCTGGATG CGTTACAGAG TCGGTCCATT TCGATTTGAG TGGTACAGCG TTTGGTGCCA TGGCGATTTC TGGTAAAGAT AGTCAGCTTC GCAATGCAGG AGTTTTGCAG ATTCTTTATA GAAAAGTTGA GTGCAACTAT GTTGGCAAAA CGGTGACGTT TCAAGTGGAT AAAGGTTCAA ACGCTTACTA CTTTGCGGCT TTAGTTGAGT ATGAAAACGG AGACGGCGAA ATTGGCCGAG TCGAACTCAA ACAAGCTCTA GATTCTGACA CGTGGCTGTC TATGACCCAA TTATGGGGTG CCGTGTGGAA GCTCGACGTG TCCTCACCTT TGCGTGCCCC GCTGTCTCTC CGAGTGACTT CGCTGGACTC CGGCGAGACT GTTGTCGCTT CCAATGTCAT TCCGGCAGGC TGGCAACCCG GAGGAGCTTG TGGGTACGGT TTCGCGGTGG CTAATCCACC ACTATATGCG ATGGTTTCAG CCGGAGGTCC TTCATTGTTC AACAATGGAA AAGGATGTGG AGCATGTTAT CAGATTGTAT GCAGCGAGAA TCCAGCGTGT TCGGGGAGAC CAATAACAGT GACGATAACC GACGAGTGCC CTGGTGGTCC TTGCGCCTCT GAACCAGCCC ACTTTGATCT TGGCGGCAAA GCCATGGGTG CCTTAGCCAA ACCTGGCCAA GCCGATCGAC TTCGATCCGC TGGTGTTCTA CGTGTTAACT ACAAACGGTA CAATTATTTA CTTAAAGAAT TTTTCGCGGC ATGTTTATAT AGAGGAACTA ACATAGCTTT CGGTATGGAT CCTGGAGCAA ATCCATACTA CATTGCATTT GTTGTCGAGT ATGAAGACGG CGATGGAGAT TTGTCCTATG TTGAACTTCA ACCAGCCGGC GGAAATTTCA TCCCCATGCA AGAAATGAGG TCCGCCGTAT GGAAGGTCAA CTCTGGCAGT GCTCTAAAAG GACCATTCAA CATCAGACTT ACTTCTGCTG AATCTCATAA AGTAGTCGTC GCTTATAATG TTATTCCGGC GAATTGGAAA CCTAGTGAAA CTTACCGTTC CATTGTTAAC TTTAAGTAG
Length1449
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT1G65680.1
Descriptionexpansin B2
TAIR curator summarymember of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)
Alias[ATEXPB2][ATHEXP BETA 1.4][EXPB2][expansin B2]
Gene coexpression
MR
MR Locus Description
9.38083 Ahg493503 O-Glycosyl hydrolases family 17 protein
13.0384 Ahg476807 Predicted AT-hook DNA-binding family protein
16.9706 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
20.2978 Ahg899542
25.1595 Ahg930701 SU(VAR)3-9 homolog 6
26.9072 Ahg316947 Pectin lyase-like superfamily protein
27.7489 Ahg487420 sucrose-proton symporter 7
29.6985 Ahg472269 laccase 8
31.4325 Ahg487283 Plant invertase/pectin methylesterase inhibitor superfamily
32.1559 Ahg916815 Glucose-methanol-choline (GMC) oxidoreductase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression