| Annotation |
|---|
| Description | jgi|Araly1|892758|Al_scaffold_0006_754 |
| Sequence |
ATGGCCTTCT CGAGAATTGC TCTTCTTTGC CAACGATTCT CTAGACAACA ACAACAACAA CGCCAACTTC ACAGACCATT CACTACAGAG CTAGATAACA CCAGATTTCT CTATCCCAAT CAATCCAAGC TTGCCCAAAA CCTGATTGCG ATCTTCACAA GACAACCTTT TTCCCCTGAC GACCCTGAGC TATTAAAACT CGCTCCAGAG CTCAACACCA AGGTAGTTGA AACAGTCTTG AATGAATTCA AAAGATGGGG TTTGGCTTAT CTTTTCTTCA ATTGGGCTTG TAAACAGGAA GGTTATAGAA ACGATATGTA TGCTTACAAT GCCATGGCTT CTATCCTATC ACGTGCTCGA CAAAATGCCT CACTGACGGC TTTGGTTGGA GATATTCTGA ATTCTCGTTG TTTAATGTCT CCCGGAGCGT TAGGGTTTTT TATTCGGTGT TTGGGTAATG CTGGGCTAGT GGAAGAAGCA AGTTCTGTTT TTGATCGAGT TAGAGAGATG GGTCTTTGTG TTCCTAATGC TTATACATAT AACTGTTTGT TAGAAGCAAT TTCTAAGTCG AATTCAAGTT CGGTTGAGTT GGTTGAGGCG AGGTTGCAGG AGATGAGGGA TTGCGGTTTT CATTTCGATA AATTTACTCT TACACCAGTT TTGCAGGTTT ATTGCAACAA TGGGAAGTCC GAGAGAGCGT TGAGTGTTTT TAATGAGATT CTTAGTAGAG ATTGGCTTGA TGAACATATT TCAACCATCT TGGTTGTGTC ATTTTGTAAG TGGGGTCAGG TGGATAAGGC CTTTGAGTTG ATTGAGATGC TCGAAGAACG CCATATTAGG TTGAACTATA AGACATTTTG TGTTTTGATT CATGGATTTG TAAAGGAGTC TCGGATTGAT AAAGCATTTC AGTTGTTTGA GAAAATGCGT CGGATGGGTA TGAACGCTGA TATTGCATTG TATGATGTGT TGATAGGAGG ACTTTGCAAG CATAAAGATC TTGAGATGGC TCTGAGTTTG TATTTGGAGA TTAAGAGGTC GGGAATCCCA CCTGATAGAG GAATACTTGG GAAGCTATTA TGTTCATTTT CTGAAGAAAG TGAATTAAGT CGGATAACAA AAGTGATCAT TGGAGACATA GACACAAAAT CTGTGATGCT TCTTTATAAA TCTTTGTTGG AGGGGTTTAT TAGGAATGAT TTGGTGCATG AGGCTTACAG TTTTATTCAG AACCTCATGG GAAATCATGA GTCGGATGGT ATGTCTGAGA TTGTGAAGCT TCTTAAGGAT CAAAATAAAG CAATCCTCCC AGATTCAGAT TCTCTTAGCA TTGTGATTGA CTGCTTAGTC AAAGCTAACA AGGTGAATAT GGCAGTGACC TTGTTACATG ATATTGTCCA GAATGGTCTT ATTCCAAGTC TTATGATGTA CAACAACATA ATAGAGGGGA TGTGTAAAGA AGGAAGGTCG GAAGAAAGCT TGAAACTCTT AGCAGAAATG AAGGATGCCG GAGTTGAACC AAGTCAATAC ACACTTAATT GTATTTATGG TTGCTTGGCT GAACGATGCG ATTTTGCAGG AGCATTGGAC CTGCTGAAAA AGATGCGTTT TTATGGATTT GAGCCATGGA TAAAGCATAC TACCTGTCTT GTCAAAAAAC TTTGCGAGAA TGGAAAGGCT GTTAATGCTT GCAAATACAT TGATGATGTA GCTGGAGAAG GTTTCCTTCG TCACATGGTT TCCTATACTG CTGCAATTGA GGGTCTCATA AGAAATGAGG GAGTAGATAG AGGTTTAGAG TTATTCCGAG ACACATGTGC CAATGGTCAC TGCCCTGATG TGATTGCATA TCATGTATTG ATAAAGGCTC TATGTAAAGC GTGTCGAACT ACGGAAGCTG ATAACCTGTT TAACGAAATG GTATCAAAAG GACTAAAACC TTCTGTTGCT ACTTATAACA GTATGATAGA TGGATGGTGC AAGGAAGGTG AGATTGACCG GGGCCTGTCT TGTATAGTGA GGATGTATGA GGATGAGAAA AACCCTGATG TTATTACTTA CACTAGCTTA ATACACGGGC TATGCGCTAG CAGAAGACCT AGTGAAGCAA TCTCTCGTTG GAATGAAATG AAGGGCAAAG ATTGCTATCC AAATAGAATT ACTTTCATGG CACTTATTCA GGGTCTTTGC AACTGTGGCT GGTCTAGTGA AGCCTTAGTT TATTTTCGTG AGATGGAAGA AAAGGAAATG GAGCCTGATT CAGCTGTTTA CTTATCCCTC GTAAGCTCTT TTCTGTCAAG TGAAAACATC AGTGCCGGGT TTGGGATATT CAGAGAAATG GTTCATAAAG GAAGATTTCC GGTTTCAGTA GATAGGAACT ATCTGCTTGC AGTTGATGCT ACAAGCGACG TCAATTACGC TTACAAGTTA TTGTCGAAAC TATCTAATCC TCCTGATTAC GGCTGGAATT TCGTCATACG AGGTTTCTCC AATAGCAAAA ACCCCGAGAA ATCGATTCGT GTCTATATCC AGATTTTGAG GTCCGGGTTT TCACCTGATC ATATGACTTA TCCGTTTCTT CTGAAGTCGA GTTCTCGTCT CTCGAACAGA GAAATTGGTG GGTCTTTGCA TTGCTCCGTG GTTAAAACTG GGCTTGAGTG GGATTTGTTC ATATGTAATA CTCTTATTCA TATGTATGGT ACGTTCCGAG ACAAAGCTTC TGCGCGCAAG TTGTTCGATG AAATGCCTTA TAAGAACTTG GTTACTTGGA ACTCTATTTT GGATTCCTAT GCGAAGTCCG GGGATGTTGT TTCGGCAAGA CTGGTGTTTG ATGAAATGAC TAAGAGAGAT GTTGTGTCTT GGAGTTCTAT GATCGATGGG TATGTAAAAA GTGGTGAATA TAATGAAGCA TTGGAAATTT TCGATCAGAT GATGAGAATG GGTTCATCAA AGGCAAATGA AGTCACTATG GTTAGCGTTT TGTGCGCTTG TGCTCACTTG GGTGCGCTAA ATCGAGGGAA GGTGGTACAT CGCTATATAC TCGATGTGCA TTTGCCCTTA ACAGTTATAT TGCAGACATC TCTTATTGAT ATGTATGCTA AATGCGGGTC GATAAGAGAC GCTTGGGGAG TTTTTTGTGG AGCATCCGTT AAGAAAACGG ATGCGTTGAT GTGGAATGCT ATGATTGGAG GGCTTGCGAG TCATGGTTTC ATAAGAGAGT CGCTCCTACT GTTTCACAAA ATGCAAGAAT CCAAGATTGA CCCGGACGAG ATAACATTCT TGTGCTTGCT TGCTGCTTGT TCCCATGGCG GATTAGTGAA AGAAGCGTGG CATTTCTTCA CAAGTCTCAA GGAAAGCGGA GCAGAACCAA AGAGCGAGCA TTATGCTTGT ATGGTCGATG TGCTTTCCCG AGCTGGGCTA GTTAAAGATG CGCATGATTT TATATCTGAA ATGCCGATAA AACCGACGGG TTCAGTGTTG GGTGCTTTGT TTAACGGGTG TATAAATCAT GGAAACTTGG AGCTTGCGGA AACAGTTGGA AAGAAGCTTA TTGAGTTACA ACCACATAAT GATGGACGAT ATGTTGGGCT TGCAAACGTT TATGCGATAA ACAAGCAGTT TGGCGCAGCT CGGTCTATGA GAGAAGCAAC GGAGAAGAAA GGAGTGAAGA AAATTGCAGG TCACAGTATA ATTGATTTGA ATGGAACATC ACACAGATTC ATAGCTCATG ACCAAACACA TTTTCACTCC GACAAGATCT ATGCAGTGTT ACAGCTGATT GGAACTGGGA TGAATCTCGA TGTTGATTAT GATGATAGTG AAGAGTGTCA TTGTTTTTGT TCTTGA |
| Length | 3846 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 3121700.. 3126756 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G08310.1 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 9.32738 |
Ahg897788 | Metal-dependent protein hydrolase |
| 16.1864 |
Ahg471752 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 20.8806 |
Ahg937676 | Ribosomal protein S5 domain 2-like superfamily protein |
| 21.6795 |
Ahg910344 | NOL1/NOP2/sun family protein |
| 24.3926 |
Ahg926612 | exocyst subunit exo70 family protein D1 |
| 38.6523 |
Ahg497128 | Homeodomain-like transcriptional regulator |
| 41.6653 |
Ahg894546 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 57.7668 |
Ahg898302 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain |
| 67.9043 |
Ahg325857 | FtsJ-like methyltransferase family protein |
| 70.2496 |
Ahg949712 | 1-amino-cyclopropane-1-carboxylate synthase 12 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|