Detail


ID : Ahg941520

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|941520|scaffold_602064.1
Sequence
ATATTTTATT TCACAGACAA AATGGAAACC CCAAACGTCA CCAGCCACAC AAATCTTCTA TCAAAGATAG ACCTAGAAAA GCAAAGCCCT GCCCCCATTT TCCCGACAAT CACTGAGCTT AAAACAGAAG CCAAGTCTCT CTTCTCCTTA GCCTTCCCGA CAATACTTGC CGCCCTCATC CTCTACGCTC GCTCCGCCAT CTCGATGCTC TTCCTCGGTC ATCTCGGTGA ACTAGAGCTC GCTGGTGGCT CCCTGGCCAT TGCCTTTGCT AACATCACTG GCTACTCCGT TCTCGCAGGC CTTGCACTCG GTATGGACCC ACTCTGTTCG CAAGCCTTTG GAGCCGGAAA ACCAAAACTC CTCTCTCTAA CTCTCCAACG AACCGTACTT TTCTTACTCA CAAGTTCGGT AGTAATCGTC GCTCTATGGC TCAACCTGGG GAAGATCATG ATCTATCTTC ATCAAGATCC AAGTATCTCA TCGTTGGCCC AAACATATAT TCTCTGCTCT ATTCCTGATT TGCTCACCAA TTCGTTTCTT CACCCTCTTC GTATATACCT TAGAGCACAA GGTATCACAA GCCCTTTAAC TCTCGCTACA CTCGCTGGCA CCATCTTCCA CATACCCATG AACTTTTTCC TCGTTTCTTA CCTCGGATGG GGTTTCATGG GAGTTTCAAT GGCCGCAGCC GCTTCAAATC TTTTTGTTGT CATTTTCCTT GTGGCCCATG TTTGGATCGC AGGTCTACAC CAGCCAACGT GGACCCGCCC CAGCTCCGAA TGTTTCAAAG ATTGGGGACC ACTGGTAAGT CTAGCCATAC CTAGCTGCGT CGGGGTATGC CTAGAGTGGT GGTGGTACGA GATCATGACC GTTCTATGTG GTTTGCTCAT AAACCCTAGT ACTCCTGTGG CAGCAATGGG CATTCTTATC CAAACGACGT CTTTGCTTTA CATTTTCCCA TCGTCTCTAG GGTTTGCGGT CTCCACCCGC GTTGGTAACG AACTTGGGTC AAACCGCCCA AACACGGCTA GGTTATCAGC CATAGTGGCG GTTTCCTTTG CTGGGGTAAT GGGTATGACG GCCTCTGCGT TTGCTTGGGG CGTAAGCGAC GTCTGGGGAC GGATCTTCAC AAACGACATT GATATCATCC AATTAACCGC AGCCGCGTTG CCGATTCTCG GGCTTTGCGA GCTCGGGAAC TGCCCGCAAA CAGTAGGTTG CGGGGTTGTA AGAGGCACCG CACGGCCGTC TAAGGCCGCG AACATAAACC TAGGAGCGTT TTACCTCGTT GGAACGCCTG TAGCCGTTGG GCTAACGTTT TGGGCCGCAT ATGGATTTTG CGGACTTTGG TTAGGTCTTT TCGCGGCCCA GATATGTTGT GCTGCCATGA TGCTATATGT CGTGGCTACT ACGGACTGGG AGAAAGAAGC AGATAGAGCC AGAAAGCTAA CGTGCACTGA AGGCGTTGAT GTGGTAATAA CAACACAAAC AAACGGAGAC TTATCGGAAC CATTAATTTA CGTTGTCACT GTCGCTACTG ACTGACATCA ATCGATGTTT TGAGT
Length1565
Protein Sequence
Protein Residue
Map Locationscaffold_6: 7943832.. 7945395
Download Sequence
A.thaliana
AGI-codeAT5G19700.1
DescriptionMATE efflux family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.38516 Ahg484770 TAPETUM 1
12.6491 Ahg951821
17.4929 Ahg482492 Predicted AT-hook DNA-binding family protein
24.3311 Ahg899940
24.7386 Ahg895302
32.9242 Ahg481945 LOB domain-containing protein 13
34.2053 Ahg947025 Galactose oxidase/kelch repeat superfamily protein
36.4006 Ahg919270 Pectin lyase-like superfamily protein
47.6235 Ahg332869 Integrase-type DNA-binding superfamily protein
48.4974 Ahg943871
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression