| Annotation |
|---|
| Description | jgi|Araly1|942793|scaffold_603337.1 |
| Sequence |
TTGTTATTTT CGAAAGAAGA GAAATGGTGG ACCTATTGAA CTCGGTGATG AACCTGGTGG CGCCTCCTGC CACGATGGTG GTGATGGCCT TCGCATGGCC ATTACTGTCT TTCATTAGCT TCTCCGAACG GGTTTACAAC TCCTATTTCG CTACCGAAAA CATGGAAGAT AAAGTTGTCG TAATCACCGG AGCTTCCTCA GCCATTGGAG AGCAAATAGC ATATGAATAT GCAAAGAGAG GAGCAAATTT GGTGTTGGTG GCGAGGAGAG AGCAGAGACT GAGAGTTGTG AGCAATAAGG CCAAAGAGAT TGGAGCCAAC CACGTCATCA TCATCGCTGC TGATGTCATC AAAGAAGATG ATTGCTGCCG TTTCATCACC CAAGCCGTCA ACTACTACGG CCGCGTGGAT CACCTAGTGA ATACAGCGAG TCTTGGACAC ACTTTTTACT TTGAGGAAGT GAGTGACACG ACTGTGTTTC CGCATTTGCT GGACATAAAC TTCTGGGGGA ATGTTTATCC GACATACGTA GCATTGCCAT ATCTTCATCA GACGAATGGC CGGATAGTCG TGAATGCATC GGTTGAGAAC TGGTTGCCTC TACCACGGAT GAGTCTTTAT TCTGCTGCAA AAGCAGCATT AGTCAACTTC TATGAGACGC TAAGATTCGA GCTAAATGGA GACGTGGGAA TAACTATCGC AACTCATGGA TGGATCGGGA GTGAGATGAG TAGAGGAAAG TTCATGCTAG AAGAAGGTGC TGAGATGCAA TGGAAGGAAG AAAGAGAAGT ACCTGCAAAC GGTGGGCCGC TAGAGGAATT TGCAAAGATG ATTGTGGCGG GAGCTTGTAG GGGAGACGCG TATGTGAAGT TCCCAAACTG GTACGATGTG TTTCTCCTCT ATAGAGTCTT CACGCCGAAT GTGCTTAGAT GGACATTCAA GTTGTTACTG TCTACCGAGG GTTCACGTAG AAGCTCCCTT GTTGGGGTCG GGTCGGGTAT GCCTGTGGAT GAATCCTCTT CACAAATGAA ACTTATGCTT GAAGGAGGCC CACCTCGGTT TCCCGCAAGC CCACCTAGGT ATACTGCAAG CCCACCTCAT TATACCGCAA GCCCACCACG GTATCCTGCG AGCCCACCTC GGTTTGCACA GTTTAATATC CAAGAGTTGT AATAAAAGCC GGATGGAGTG TCG |
| Length | 1193 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 18872480.. 18874535 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G10020.1 |
| Description | hydroxysteroid dehydrogenase 5 |
| TAIR curator summary | Encodes a putative hydroxysteroid dehydrogenase (HSD). Genes that encode HSD include: At5g50600 and At5g50700 (HSD1), At3g47350(HSD2), At3g47360(HSD3), At5g50590 and At5g50690(HSD4), At5g50770(HSD6) (Plant Cell Physiology 50:1463). Two copies of HSD1 and HSD4 exist due to a gene duplication event. In Plant Physiology 145:87, At5g50690 is HSD7, At4g10020 is HSD5. |
| Alias | [AtHSD5][HSD5][hydroxysteroid dehydrogenase 5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 11.1355 |
Ahg896507 | |
| 16.0312 |
Ahg901222 | homeobox-3 |
| 16.7332 |
Ahg484770 | TAPETUM 1 |
| 20.9762 |
Ahg312221 | Pectin lyase-like superfamily protein |
| 23.4947 |
Ahg357417 | Protein kinase superfamily protein |
| 24.6171 |
Ahg917658 | subtilase 4.13 |
| 39.3827 |
Ahg948141 | Heat shock protein HSP20/alpha crystallin family |
| 43.0116 |
Ahg910083 | C2 calcium/lipid-binding plant phosphoribosyltransferase family protein |
| 43.6234 |
Ahg912947 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
| 44.2945 |
Ahg355720 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
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| The four seasons |
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| Growth Chamber expression |
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