Detail



ID : Ahg945158

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|945158|scaffold_701387.1
Sequence
CTCTCAATCC TCTTGTAACA ATGGCGACGA GTCTCTCTTG CTCTGCCTCT GATCTGATTC CTCTACTATC CGGCGGAGCC AATGCCACCG CCGCAGCCGC TGCCGCTGAA TTCATCTGCG GGAGATTCGA CACAGTCGCC GGGAAATTCA CCGACGCGGC TTACGCCATC GACAACACTT ACCTTCTCTT CTCCGCTTAC CTCGTTTTCG CGATGCAGCT AGGATTCGCC ATGCTCTGTG CCGGATCTGT ACGTGCTAAA AACACGATGA ACATTATGCT CACCAACGTC ATCGACGCTG CAGCCGGAGG TCTGTTCTAT TACCTCTTCG GTTTCGCTTT CGCTTTTGGA TCTCCTTCTA ATGGATTCAT CGGAAAACAT TTCTTTGGAA TGTATGATTT TCCTAAACCT ACGTTTGATT ATCCTTATTT TCTATATCAA TGGACTTTCG CTATCGCCGC CGCCGGAATC ACCAGTGGTT CGATCGCGGA GAGGACTCAG TTCGTGGCGT ATTTGATCTA CTCTGCTTTC CTCACGGGTC TTGTTTACCC GATTGTGTCG CATTGGTTTT GGTCTTCTGA TGGTTGGGCT TCTCCGGCTA GATCTGAGAA CCTTCTGTTT CAATCAGGTG TGATTGATTT CGCTGGCTCT GGTGTTGTTC ATATGGTTGG AGGTATTGCT GGTTTATGGG GAGCTTTAAT TGAAGGACCA AGAATTGGTC GGTTTGGAGA TGGGGGTAAA CCGGTTACGT TGCGTGGTCA TAGTGCTACG TTGGTTGTTC TTGGAACGTT TTTGTTATGG TTCGGATGGT ACGGGTTTAA CCCTGGATCG TTCGCAACCA TTTTTAAGTC GTATGGAGAG ACTCCGGGGA ACTCGTTTTA CGGACAGTGG AGCGCGGTTG GAAGAACGGC GGTTACAACC ACGTTAGCTG GTTGCACGGC GGCGCTAACG ACTCTGTTTG GGAAAAGACT TATTGATGGG TATTGGAATG TAACTGATGT TTGTAATGGT TTGTTAGGCG GATTCGCTGC TATAACTAGC GGATGTTCGG TTGTGGAACC GTGGGCCGCG CTTATATGCG GGTTTGTAGC CGCGTGGGTG CTGATGGGAT TCAATAGACT AGCTGAAAAG CTCCAATTCG ACGATCCGTT GGAAGCGGCT CAGCTTCACG GCGGTTGCGG CGCGTGGGGG ATTATTTTCA CCGGGTTGTT CGCGGAGAAA AGATACATTG CTGAGATCTT TGGAGGGGAC CCGAACAGGC CTTACGGGTT GCTAATGGGA GGAGGAGGTA GGTTGCTTGC GGCGCACGTC GTTCAGATTT TGGTGATTAC GGGATGGGTT AGTGTGACAA TGGGGACTCT ATTTTATATT TTGCATAAGC TGAAACTGTT GAGGATACCG GCGGAGGATG AGATCGCCGG GGTGGATCCG ACGAGTCATG GAGGGTTGGC TTATATGTAC ACAGAAGATG AGATCAGGAA TGGGATCATG GTTAGGAGGG TGGGCGGTGA TAATGCTCAA GGAAATGTAC GTGTTTGATT TGTTTGGTTT CAATACTATT 
Length1560
Protein Sequence
Protein Residue
Map Locationscaffold_7: 5287749.. 5289296
Download Sequence
A.thaliana
AGI-codeAT4G28700.1
Descriptionammonium transporter 1;4
TAIR curator summary
Alias[AMT1;4][ammonium transporter 1;4]
Gene coexpression
MR
MR Locus Description
31.1609 Ahg942510 transposable element gene
42.7785 Ahg358371 Pectin lyase-like superfamily protein
56.9737 Ahg481945 LOB domain-containing protein 13
67.1416 Ahg938381 Proline-rich extensin-like family protein
74.619 Ahg904884 RNA-binding protein
74.7663 Ahg907632
79.3725 Ahg341831
85.8836 Ahg359063 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
86.0116 Ahg936571
98.2853 Ahg341841 transposable element gene
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression