Detail



ID : Ahg945283

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|945283|scaffold_701512.1
Sequence
GATCAATCAA CAAACAAACT ATGGCGCAAT CTCTCGAACT TCTCTTGATC CAATTCCTCA TGCCTGACAA CGATGCTCGG CGTCAAGCAG AGGATCAGAT CAAACGTCTT GCCAAAGATC CTCAAGTTGT TCCCGCTCTT GTTCAGCATC TCCGCACCGC TAAAACCCCC AACGTCCGCC AGCTCGCTGC CGTCCTCCTC CGCAAAAGAA TCACCGGACA TTGGGCTAAG CTTTCTCCTC AGCTTAAGCA GCATGTTAAG CAATCCTTAA TCGAGAGTAT CACTGTTGAG AATAGTCCAC CGGTGAGGCG TGCGAGTGCT AATGTTGTGA GTGTAGTAGC CAAGTACGCT GTTCCAGCTG GAGAGTGGCC TGATTTATTA ACCTTTCTCT TTCAGTGTAG TCAGAGTGCT CAAGAAGATC ATCGTGAAGT AGCATTGATT CTTTTCAGCT CTTTGACTGA AACGATTGGG AACACATTTA GGCCATACTT TGCCGAGTTG CAGGCTCTTC TTCTTAAGTG TATGCAGGAT GAAAGCAGTA GTCGAGTCAG AGTTGCTGCT CTCAAGGCGG TTGGTTCTTT TCTTGAATTC ACAAACGACG GGGATGAAGT GGTCAAGTTC CGAGATTTCA TTCCCAGTAT ATTGGATGTA TCAAGGAAAT GTATTGCATC TGGCGAGGAG GATGTTGCTA TACTTGCTTT TGAAATTTTT GATGAGCTGA TTGAATCTCC TGCTCCCCTT CTTGGAGATT CTGTCAAATC AATTGTGCAG TTCTCTCTTG AAGTTTCCTG TAATCAAAAT CTGGAAAGTA GCACCCGTCA CCAGGCAATC CAAATAGTTT CATGGTTGGC AAAGTACAAA TACAATTCCC TTAAAAAATA TAAGCTAGTC ATACCAGTTT TGCAAGTTAT GTGCCCTTTA CTTGCTGAGT CATCTGATCA AGACGACGAT GATGATCTTG CTCCTGATCG TGCAGCTGCT GAAGTTATTG ACACTCTAGC TATGAATCTG CCAAAGCATG TATTCCTCCC TGTTATTGAA TTTGCTTCCA TGCATAGTCA AAGTACAAAC CTGAAGTTTC GGGAAGCATC TGTAACAGCT CTAGGTGTTA TATCGGAGGG TTGCTTTGAT CTGATGAAAG AGAAGCTGGA CCTTGTTCTT AACATAGTCT TAGGAGCTTT AAGAGACCCT GAGCTAATGG TTCGAGGGGC TGCATCATTT GCAATTGGCC AATTCGCCGA GCATCTTCAG CCCGAAATCC TCTCGCACTA TCAGAGTGTC CTTCCATGCC TATTGAATGC GATTGAAGAT ACATCTGAGG AAGTGAAGGA AAAGTCACAC TATGCTTTAG CAGCATTCTG TGAGAACATG GGAGAGGAAA TTGTTCCGTT GCTTGATCAT TTAATGGGGA AGCTTATGGC AGCCCTTGAA AATAGTCCGC GTAATCTACA GGAGACATGC ATGTCTGCAA TTGGGTCGGT TGCTGCTGCT GCAGAGCAAG CCTTCAATCC ATATGCTGAG AGGGTTCTAG AGTTAATGAA GTTTTTCATG GTGCTCACCA AAGACGAGGA TCTCCGTGCC CGTGCCAGGT CTACTGAGCT TGTAGGGATT GTTGCAATGT CTGTTGGGAG AAAAGGGATG GAGGCCATTT TGCCACCTTT CATTGATGCT GCAATATCAG GATTTGAATT GGACTTCAGT GAGTTGCGAG AATATACTCA TGGATTCTTC AGCAACGTAG CTGAAATATT GGATGACACT TTTGCCCAGT ATTTGCCTCG CGTTATGCCA TTAGTATTTG CTTCGTGCAA TCTTGATGAT GGATCTGCAG TGGACATTGA TGAGTCAGAC GATGAAAATG TCAATGATTT TGGCGGGGTA TCCTCTGATG ATGATGCTCA CGATGAGCCC AGAGTTCGGA ACATTAGCGT TAGAACAGGA GTTTTGGATG AAAAGGCAGC TGCAACTCAA GCTCTTGGCC TGTTTGCACT CCACACTAAA TCTTCTTTTG CACCCTATCT CGAGGAATCA TTGAAGATTA TGGACAAACA TTCTGCATAT TTTCATGAAG ATGTTCGGCT TCAAGCAGTT ACTGGTTTGA AACATATATT GGCTGCAGCG CATGCTATTT TCCAGACTCA TAATGATGGA ACTGGGAAGG CAAATGAAAT TCTTGATACA GTTATGAATA ATTATATCAA AACTATGACT GAAGATGACG ACAAGGAGGT TGTTGCTCAG GCTTGCATGA GTGTAGCCGA TATAATGAAG GATTATGGTT ACGTAGCCAT TCAAAAGTAT TTATCACCCC TTGTTGACGC GACATTGCTA CTGCTGACGG AGAAAGCAGC TTGCCAGCAG TTAGAAGATG AGAGTGATAT TGATGATGAT GATACTGGAC ATGATGAGGT CCTCATGGAT GCAGTTTCTG ACCTCCTTCC CGCCTTTGCA AAGTGTATGG GTTCTCAATT TGAACCTGTC TTTGCCAAAT TCTTTGAGCC GTTGATGAAA TTTGCGAAAG CTTCACGTCC CCCACAGGAT AGGACAATGG TAGTTGCTAG TCTTGCTGAA GTTGCTCAAG ACATGGGTCC TCCAATCTCT GCCTATGTTG ATAGATTAAT GCCGTTGGTG CTCAAAGAAT TGGGCTCACC AGAAGCAACC AATAGAAGGA ATGCAGCTTT CTGTGTTGGA GAGCTATGCA AAAACGGGGG TGAAACTGCT CTTAAATATT TTGGTGATGT GCTACGCGGA ATTTCCCCGC TTTTCGGGGA TTCAGAACCA GACCTTGCTG TTAGGGATAA TGCAGCAGGT GCTACCGCAA GGATGATTGT TGTTCATCCT CAACTAGTCC CGCTAAATCA AGTACTTCCA GTGTTCTTAA GAGGTCTACC CCTAAAGGAA GATCAAGAGG AGTCCATGGC TGTTTACAGC TGTATATATT CCCTTGTTTC GTCATCCAAT CCACAGATCT TCTCTCATGT TCCGGAGCTG GTTAAAATCT TTGGGCAAGT TCTGGAGTCG CCAGTCGAAA AAGTTGAAGT GAAAGCAATT GTAGGCAGAA CCTTCTCCCA TCTAATCTCG GTTTATGGGA ATCAGTTGCA GCCAATTATA AGTAGTCTAC CGCCTTCTCA AGCAAACGTT CTTGCTGCGT TTGCATCTAC TAGTTGATTG TCGCTTGTGG TATATTT 
Length3187
Protein Sequence
Protein Residue
Map Locationscaffold_7: 5699565.. 5704865
Download Sequence
A.thaliana
AGI-codeAT4G27640.1
DescriptionARM repeat superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.7082 Ahg489026 LA RNA-binding protein
9.21954 Ahg489315 Transducin/WD40 repeat-like superfamily protein
10.198 Ahg941041 PHD finger family protein
11.7473 Ahg478494 Tetratricopeptide repeat (TPR)-like superfamily protein
14.6287 Ahg479149 TOPLESS-related 2
15.8114 Ahg948606 chromatin remodeling 4
16.5227 Ahg888770 F-box family protein
18.7617 Ahg476825
19.2873 Ahg489491 Glutamyl/glutaminyl-tRNA synthetase, class Ic
19.8997 Ahg939388 zinc finger (C3HC4-type RING finger) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression