Detail



ID : Ahg948672

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|948672|scaffold_800559.1
Sequence
GTAAGTGTCT TTCTTACCGG ATGAACCACA ACACCGTCGA ATCCAAAGTC ATACACACTT CCAAAGACTC TTCCTTTTTC TCCATTTTGG ATTCTTCCAT ACAAAATCCA AGATTCTCGG TTTCTGAAAC ACCTAAACCG GTCTCAATCA TAACTCCGGT TAAAGCCAGT GACGTTCAAA CCGTGATCAG ATGCGCACGG TTGCATGGAA TTCATGTAAG GACTCGGAGC GCCGGTCACT GCTACGAAGG TCTATCGTAC ATTGCGTACA ACAAACCATT CGTTGTCATC GATATACGGA ATCTTCAGTC TATATCATTA GACGTCGATA ACCGGACCGG TTGGGTCCAA ACCGGAGCAA CGGCTGGGGA ATTGTATTAT GAGATTGGGA AAACCCCCAA AACTCTTGCT TTCCCGGCCG GTATTCACCC AACTGTCGCT GCGGATAACA TAATCGATGC ACTTGTGGTC GATGCGAGTG GGAGGATTCT TGACCGACAA GCAATGGGCG AGGAGTACTA CTTTTGGGCG ATTTGTGGAG GGGGCGGATC AAGCTTTGGC ATTATACTAT CGTGGAAGAT TAAATTAGTC GATGTTCCAT CTACAATAAC CGTGTTTAAA GTCAAGAGAA CATCAAAGAA AGAGGCCGTT AGGATCATCA ACAAATGGCA ATATGTTGCA GATAAGGTTC CTGATGATCT TTTCATTAGG ACAACATTGG AGAGATCAAA CAAAAACGCA GTACACGCTT TGTTCACTGG TCTTTATCTC GGTCCCGCGA ACAATCTTTT GGCGTTGATG GAAGAAAAGT TTCCGGAATT AGGTCTTGAG AAAGATGGTT GCACAGAGAT GAGTTGGGTT GAGTCTGTAC TCTGGTTTGC TGATTTCCAT AAAGGAGAAT CTCTTGATGA TGTTCTCACG AATCGAGAGC GTACATCTCT ATCTTACAAG GGAAAAGATG ATTTTGTCCA AGAACCGATA CCCGAGGCTG CAATTCAAGA GCTATGGAGG CGATTAGACG CCCCCGAGGC TCGACTTGCA AAGATCATAT TAACTCCATT TGGTGGGAAA ATGAGTGAAA TTGCAGAGCA CGAAACACTA TTCCCACATC GAGAAGGGAA TCTCTATGAG ATTCAGTATG TGGCTTACTG GAGAGAAGAG GAAGACAAGA ACATGACGGG GACAAATAAA TATCTGAAAT GGGTCGATAG CGTTTACGAA CTTATGACTC CATATGTTTC GAAATCTCCA AGAGGAGCTT ATGTCAATTT CGTGGATATG GATTTGGGTA TGTATCTTGG AAAGAAGAAG ACAAAGTACG AGGAAGGAAA GAGTTGGGGA GTGAAGTACT TCAAGAACAA TTTCGAGAGA TTGGTGAGAG TTAAAACGAG TGTTGATCCA ACAGATTTCT TCTGCGATGA ACAGAGCATT CCCCTGCTGA ACAAAGTTAC CTAAAGATAT CATTTGAAGT TTTT 
Length1474
Protein Sequence
Protein Residue
Map Locationscaffold_8: 3108797.. 3110330
Download Sequence
A.thaliana
AGI-codeAT5G44440.1
DescriptionFAD-binding Berberine family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
18.7083 Ahg323331 F-box and associated interaction domains-containing protein
30.4631 Ahg926787
46.7333 Ahg915188
51.8459 Ahg347590 DC1 domain-containing protein
62.9285 Ahg938811 TRAF-like superfamily protein
65.3835 Ahg901222 homeobox-3
68.3301 Ahg497040 Adenine nucleotide alpha hydrolases-like superfamily protein
70.214 Ahg478121 Pectin lyase-like superfamily protein
72.1388 Ahg942130 Leucine-rich repeat (LRR) family protein
80.05 Ahg936933
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression