| Annotation |
|---|
| Description | jgi|Araly1|949655|scaffold_801542.1 |
| Sequence |
TCTTTCTTCT TCTCCGCATT CTCATGGCCA ATTATCCACC AACGGTGGCG GCGCAATCCT CAACGGCGGC GATTCCACTG CTGCACCAGC GACACCAATC TGAACGACGA CGTGGAGAAT TACCGGCGGT TGTCGAAACA GAGTCTACAG CTATGGAAAT TTCGATCGGT CAATCTAAGC AGCCTCAATT TTTGAAATCC ATAGACGAAT TGGCTGCGTT TTCAGTTGCA GTGGAAGCAT TCAAACGCCA ATTCGATGAT CTTCAGAAGC ACATCGAGTC AATCGAAAAC GCAATTGATT CCAAACTCAA GAGTAACGGC GCCGACCTCG CCGCTTCTTC CAATTTCCAT CAGCCGTTGT TATCGCCTCC GCGGAACAAT GCCTCCGTAG AGACCACCGT GAGTTTGAGC CAATCGTCAC AGGAGCCTGC GGAGACTGTA CCGGAGACGT CGAATAAAGC GGAGGGGGAA CGGTTGTGTG AGTTGATGTG TAGCAAAGGT CTGCGTAAAT ACATATACGC GAATATCTCT GATAGAGCTA AGCTAATGGA AGAGATTCCT TCAGCTTTGA AATTGGCTAA GGAGCCAGCG AAGTTTGTGT TGGAATGTAT TGGGAAGTTT TACTTACAAG GGCGTAGAGC ATTTACGAAA GAGTCGCCTA TGGTCTCTGC GAGACAGGTT TCGCTTCTTA TTTTGGAGTC TTTTCTTCTA ATGCCTGATC GTGGTAAAGG GAAGGTCAAG ATTGAGAGTT GTATAAAGGA TGAGGCGGAG GCGGCTGCTG TTGCGTGGAG GAAAAGACTG ATGAGCGAAG GAGGATTAGC TGCGGCAGAG AAAATGGATG CAAGGGGTTT GCTTTTACTA GTTGCTTGTT TTGGGGTTCC TTCAAACTTA AGGAGTATGG ATTTGTTGGA TTTGATACGG ATGAGTGGTT CGAATGAGAT TGCGGGTGCT TTGAAGCGGT CACCCTTTCT TGTCCCTATG ATTCCAGGTA TAGTTGAATC AAGTATCAAG CGTGGAATGC ATATTGAAGC TCTTGAGATG GTTTATACCT TTGGGATGGA GGATAAGTTT TCAGCTTCTT CTGTTCTAAC TTCATTCTTA AGGATGAGCA AGGAGTCATT TGAGAGGACA AAACGGAAAG CCCAGTCACC GCTGGCATTT AAAGAGGCGA CTGCAAAGCA GCTAGCTGCG TTATCATCAG TGATGCAGTG TATGGAGACT CACAAGTTAG ATCCTGCGAA AGAACTACCA GGGTGGCAGA TCAAAGAGCA AATTGTTAAT TTGGAGAAAG ACACTCTTCA GCTCGACAAA GGGATGGAAG AGAAAGCAAG ATCCATCAGT TTAATGGAGG AAGCGGTACT CGCCAAGAGA ATGTATAACC AACAGATGAA ACGTCCAAGG TTGTCACCCA TGGAGATGCC ACCAGTAGCT TCGTCATCAT ATTCTCCTAT CTACCTTGAT CGTAGCTTTC ATAGTCAGAG AGACGAAGAT AGAGATGAAA TATCAGCTCT TGTGAATAGT TACCTCGGCC CGTCATCATC TTTTCCTCAT CGCTCAAGTC TCAGGAGATC CCCTGAATAT ATGGTTCCAC TTCCACCTGG TGGGTTAGGA AGAAGCGTAT ATGCATATGA ACATCTACCT CCAAATTCAT ACTCTCCGGG TCACGGACAG AGACATCCAC GACAGTACTC TCCTCCAGTT CATGGACAAC AACAAATACC ATTTGGTCTA CAAAGAGTTT ACAGACATTC ACCATCTGAA GAAAGATATT TGGGTTTATC CAATCACAGG TCTCCTCGTA GTAACTCATC ACTAGACCCC AAATAGGAGG AATGTAAATT TGTAAC |
| Length | 1846 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 13497863.. 13500217 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G00650.1 |
| Description | FRIGIDA-like protein |
| TAIR curator summary | Encodes a major determinant of natural variation in Arabidopsis flowering time. Dominant alleles of FRI confer a vernalization requirement causing plants to overwinter vegetatively. Many early flowering accessions carry loss-of-function fri alleles .Twenty distinct haplotypes that contain non-functional FRI alleles have been identified and the distribution analyzed in over 190 accessions. The common lab strains- Col and Ler each carry loss of function mutations in FRI. |
| Alias | [FLA][FRI][RSB7][FLOWERING LOCUS A][FRIGIDA][REDUCED STEM BRANCHING 7] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 15.9687 |
Ahg943674 | transducin family protein / WD-40 repeat family protein |
| 38.0657 |
Ahg324042 | |
| 45.9347 |
Ahg901754 | ENTH/VHS/GAT family protein |
| 48.7032 |
Ahg491060 | RNA polymerase II large subunit |
| 57.4282 |
Ahg488154 | Auxin-responsive GH3 family protein |
| 57.4456 |
Ahg940314 | peroxisome 1 |
| 58.7367 |
Ahg493685 | beta glucosidase 42 |
| 60.9918 |
Ahg897056 | |
| 64.0625 |
Ahg937338 | hercules receptor kinase 1 |
| 68.1175 |
Ahg927779 | Leucine-rich repeat protein kinase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|