Detail



ID : Ahg949695

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|949695|scaffold_801582.1
Sequence
TCCTCAAAAT CACTGAGATT AAACAAATGG CGGCTACTGA TTTTTTCTTC GCTTTCGTCT TCTCCTTCGC TCTTCTCTTC GGCTTCTCTT TCGCTGGTGA TCCTTACGTA TCTTACGATT TCAGTGTTTC GTACATCACA GCTTCTCCTC TCGGTGTTCC TCAACAGGTT ATAGCAGTCA ATGGGAAATT TCCAGGTCCT GTGATTAATG CTACTACAAA CTACAATGTT GATGTTAACG TATTCAATCA TTTGGATGAG CCTCTCTTAC TTACTTGGCC TGGTGTTCAG ATGCGGCGTA ACTCGTGGCA AGACGGTGTT CTTGGAACAA ACTGTCCAAT TCCACCGAAA TGGAACTTCA CTTATGATTT TCAGTTGAAA GATCAGATTG GAAGTTATTT CTACTCTCCT TCACTTAACT TCCAGAGAGC CTCTGGTGGT TTTGGTTCAA TCATAATCAA TAACCGAGAC CTCGTTCCTA TCCCGTTCAC TAAGCCTGAT GGTGAAATCA TCTTTATTAT TGGTGATTGG TATACTCAGA ACCATACAGC TTTAAGGAGG ATACTTGACT CTGGTAAAGA ACTTGGGATG CCGGATGGAG TGCTCATCAA TGGGAAAGGT CCTTTCAAGT ACAATAGCAG TGTTCCTGAT GGAATTGAAC ATGAAACCGT TAATGTTGAT CCAGGGAAGA CATACAGGAT CCGCGTTCAC AATGTTGGTA TCTCGACAAG CTTGAACTTC AGGATTCAGA ACCACAAATT GCTCTTGATT GAGACTGAGG GTCGCTACAC CTCCCAAATA AACTTCACCG ATTTCGATAT TCATGTGGGA CAGTCTTATT CTTTCTTGGT AACCATGGAC CAAAACGCCA CAAGTGATTA CTACATTGTG GCGAGTGCTA GATTTGTTAA TGAAACAGTG TGGCAAAGAG TCACAGGTGT TGGCATTCTC CATTATTCCA ATTCCAAAGG ACCTGCTTCT GGTCCTTTGC CAGTTCCAGC AACTGATGTT TCTCACCCTT GGTCCGCAAT GAACCAACCA AGAGCCATAA AGCAAAACAC ATCTGCAGGT GGAGCTCGTC CAAATCCGCA AGGATCATTT CACTACGGAC AGATAAATAT CACAAGCACA TACATCTTGA GGAGTTTGCC TCCAACAGAA ATCAATGGGA AAATTCGTGC TACGCTTAAT GGGATTTCAT TTGTCAATCC AAGCACCCCC ATGAGGCTTG CAGATCACCA TAAAGTGAAA GGAGATTATA AGCTAGATTT CCCAGACAGA CCACTTGATG AAAGACATCA ACGTATGGAC AGCTCTATCA TCAACGCATC ATACAAGGGC TTTATACAAG TTATCTTCCA GAACAATGAC ACCAAAATCC AGAGCTTCCA TATTGATGGA TATTCATTTT ACGTGGTTGC AATGGACTTT GGTATATGGT CAGAAGACAG AAAAGGTTCA TATAACAACT GGGATGCAAT TGCACGAAGC ACGATCGAGG TTTATCCAGG GGCATGGACT GCTGTACTTG TTTCCCTCGA TAATGTTGGA GTTTGGAACA TTCGAGTAGA GAATCTTGAC AGATGGTATC TTGGTGAAGA AACATACATG CGAATTGTAA ACCCCGAGGA AAACGGAAGT ACAGAAATGG ATCCGCCTCA AAATGTTCTG TACTGTGGTG CTCTTCAGGC CATGCAAAAG GAACAACATC ACAGCTCTGC TGGAACATCA ATACTAAATG GACAGTTGAA ACTAATTTTC AGCATGATGA TGTTTTTGCT CGCCTCGGTT TCAGCCTTTT GCTGAGTCTC TTGCATCATT TAGGA 
Length1825
Protein Sequence
Protein Residue
Map Locationscaffold_8: 13698877.. 13701625
Download Sequence
A.thaliana
AGI-codeAT5G51480.1
DescriptionSKU5 similar 2
TAIR curator summary
Alias[SKS2][SKU5 similar 2]
Gene coexpression
MR
MR Locus Description
3.16228 Ahg316004 Protein of unknown function (DUF1163)
4.24264 Ahg923704 O-methyltransferase family protein
6.9282 Ahg342380 alternative oxidase 1B
28.3373 Ahg908047
33.3167 Ahg915674 F-box/RNI-like/FBD-like domains-containing protein
34.5977 Ahg904679
37.0405 Ahg330886 zinc transporter 8 precursor
41.6653 Ahg487163 PEBP (phosphatidylethanolamine-binding protein) family protein
52.2015 Ahg487408 C2H2 and C2HC zinc fingers superfamily protein
54.7905 Ahg921411 Domain of unknown function (DUF220)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression