Detail



ID : Ahg950561

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950561|scaffold_802448.1
Sequence
AAAGAACGTC AGGATCAAAC ATGGAGGGAG AAACCGCAGC CAAAGCAGCG GCTAGTTCCT CCTCATCCCC AAGCCGGTAC GAGTCACAAA AGAGGCGAGA CTGGAACACT TTCCTTCAGT ATCTAAGGAA CCACAAGCCA CCTCTGAATC TGTCTCGTTG TAGTGGCGCA CACGTCCTTG AGTTCCTTAA GTACCTCGAC CAGTTTGGTA AAACCAAAGT CCATGCCACG GCTTGTCCCT TCTTCGGACA ACCTAACCCA CCGTCTCAGT GCACTTGCCC TCTCAAGCAA GCTTGGGGAA GCCTCGACGC TCTCATTGGC CGTCTAAGGG CTGCTTTCGA GGAAATCGGC GGTGGTCTTC CTGAGTCAAA CCCTTTCGCT GCCAAAGCTG TTAGTATCTA TCTTAAGGAA GTCCGTCAAA CTCAGGCTAA GGCTCGAGGG ATTCCTTACG ACAAGAAGAA ACGGAAACGA CCTCATACAG CCACAGCAAC TCCAATCGCC GGTGATGGAG ACGACGCCGG AGGAAGTGGT GCTGCTTTGG TCGTAACCAC TGCAACTACG GTATAATCGA GAATATCGAG ATACGC 
Length586
Protein Sequence
Protein Residue
Map Locationscaffold_1: 2424824.. 2425221
Download Sequence
A.thaliana
AGI-codeAT5G58500.1
DescriptionProtein of unknown function (DUF640)
TAIR curator summary
Alias[LSH5][LIGHT SENSITIVE HYPOCOTYLS 5]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg916733 Protein of unknown function (DUF1278)
14.8324 Ahg475164 equilibrative nucleoside transporter 7
22.2711 Ahg923226 Protein of unknown function (DUF1191)
28.9655 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
31.273 Ahg921385
42.1426 Ahg943324 RNI-like superfamily protein
49.2138 Ahg322168 expansin B2
60.1997 Ahg916295
62.5939 Ahg343373 Pentatricopeptide repeat (PPR) superfamily protein
62.7455 Ahg938968 Leucine-rich repeat (LRR) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression