Detail



ID : Ahg950983

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950983|scaffold_802870.1
Sequence
AAAACTTGAC TAAACAAAAA ATGGGAAGAG ACTGGTCCTG GCTCGGCGGA GGCGGCGGAG GGAAGAAGAA ATCCTCAAGC AAGTCAAAGA AAGAAGACAT TAAACCACCG CCGTCGCCGC CATCTTTCGC CGGAAATACT GCAACGGCGG CGGGATGCAT GAGTGCTGTG TTCAACATTT TCGATTTTCA ACACTTACAG TTTCCTATTA ACCACCACCA TCTTCATCTT CCCAAAGGAG TAGATGCACC GAGAAACAGC TTGGAATCAA CGGAGGAGAC AGAGGAGGAA ACTCCATTTT CACCAACCAG AAAAGATGGA AATTTAAATA TCTCTATGGG TATTAAAATC AAGACCAAAC AACAAGCAAG ATCATCATCA GCATCTCTTA CACCCACTGA AACTTATTCT CCGAGCATAA AGACACCAAC TTTGGTTGCT AGACTCATGG GTCTTGATCT TGTTCCTGAT AATTACAGAT CATCTCCTAC TCCATCTTCT TCATCTTCTT CTACCTTAAT TGATCTCAAG ACGCCAACAA GATCTTCTCA CGCCAACAAA CACAGACATT ACTCTCTCCA AAGAAACTCT ATCGACGGAG GTACACGTTC TCTTCCCGAA ACACCGAGGA TTTCACTCGG AAGGAGATCC GTTGACGTCA ACTGTTACGA ACACCAACGT TCTTCACTTC ATCTCAGAGA CAACAACAAC AACAGCAACG TGTTTCCCGA AAGAGAGGCT GGTATTAACA ATGTCAGGCT CACAAGGGTC AAAGAGATGA AGATACATGA AGATAAAGAG AATCGGAGTC CACGAGAGTA CGCTAGACAG ATAGTAATGC AGTTGAAGGA GAACGTTAGC CGAAGAAGAA GAATGGGAAC TGATATAACC AACAAAGAAC AACAATCAAG AGAGATTCAT GAGTCCAAGA AAGCTTCTTC TAAGATTACA ACAATCATCA CTCATGATTC CTCATCATCC CCGAGATTAG GATTAACAGA AATCCCCAAA ACCAAACCAA ACTCACCTCA GACAAATAAT GTTGCTACCA AGATTCTGGA GAAAACAACA GTGAAGGTTC AAGACAAGAC CAGATTATCA ACAGCGCAAG AAGAGCCACA GGGAGAACAA GGACAACAAG TGAAAGAAAA ACAGAGGAAG TCTACAAAGA AATGCAAGAA ACCAGAGAAT TTCAAGTCGA GATTAGTGAA GCCGCCACAG ACAATGCAAG AAGAGCCGTT TGTTCGATCA CCATTAACAA GTAACAACAA GAACAACAAT GGTCTTCTTC TTATTCAAGG AGACAAATCT TCATGCAAGA AAACTCCTTT ATCCATTAAT CATCTCATCA ACTTCACTAG TGTTCCCACC ATCAAGAAGA AAGATTCATC ACTTCATCAC AAATCGTCAA ACTTAAAGCT CAGAGAAACA CAAACACCAA GAAACAGAGC ATCATCAGAG ATTCCTAGTT TCCCGAGCCC ACCAATCGCC GGCGGCGAGT TAGAGTACAT AACAAGAACC CTAAGACGAA CAGGAATCGA CAGAGACACA CCAATCTCAT ACGCTAAATG GTTCTCTCCT TCACACCCAC TCGATCCATC AATCTTCTAC TTCCTCGAAC ATTTCGCTGT TACATCAACC AGACCTAGAA ACTCACCGGA AAATCTAGCT CTTCGATGCA ATAGAAAGCT ACTCTTCCAC TTAGTAGACG AAATCCTCGC CGATATCTTA AAGCCACACA TCAATTTGAA ACCTTGGGTT TGCCATTACC CGATTCAATC TCAGAGGAAT CTAAAGGGAT CGGAGCTAAT CGACGAGTTA TCTCGGAGAA TCGAGCGGTT TCCGTTAGCA GAATGTTTGG TTCTCGAAGA CATTGATGCT CTCGTCGCCG GAGATTTCCC GGAGATTGAA TCGGCGTTTG AAGAAGACGG CGAAGGAATC GTCACGGAGA TCGAGAGAGG AATCTTGGAA ACACTCGTGA CTGAAACGAC GACGGATTGC TTTGCCACGT GGATGGTCAA AACGGCGCCG CTTAAGCGTA ACGATGATGT CAGTGGCACG TGGGGTGTTC ACGTGACGAG ATACTCTTCA AATGTGGGGT CCCACCACGA CTCGTCCTCT TTGAGATTAA GGCTTCCACG TGGATAAAAG AATTCCACAT GGCAGAC 
Length2167
Protein Sequence
Protein Residue
Map Locationscaffold_8: 19141111.. 19143527
Download Sequence
A.thaliana
AGI-codeAT5G62170.1
Description
TAIR curator summary
Alias[TRM25][TON1 Recruiting Motif 25]
Gene coexpression
MR
MR Locus Description
22.7596 Ahg474258 ABC-2 type transporter family protein
46.2277 Ahg495065 ethylene response factor 110
49.97 Ahg496986 Chalcone-flavanone isomerase family protein
50.0799 Ahg489527 Galactose oxidase/kelch repeat superfamily protein
69.814 Ahg917658 subtilase 4.13
73.1437 Ahg893903 glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS, putative
81.719 Ahg920074
83.012 Ahg949205 transposable element gene
91.5696 Ahg472719 galactosyltransferase1
95.289 Ahg354612 gibberellin 3-oxidase 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression