Detail



ID : Ahg912885

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|912885|Al_scaffold_0001_3139
Sequence
ATGGGAGCAG AAGAAGTTCC GAGTGTTCCT TTCAGCTCAA ATGCAATGGA CAACGCTGAT TATAGCGACA CAGAATTGGT GCATGCCGTT AGAAAGGCCC TTGCATCTGT CCAAAATGGG GATACCGACG ATTATAGTCA GCTTAAAACA GTGATGTGCC ATAAAGACTA TTCTGATTTC GATGCAGTGG CAAACTATGA GACAGTCTTG AGAATTCTAT CAGTTTCTGT TGCTTGCATA AATGTAGTTC ACCATGAAGA TCTTCTTAGA ACTATTTTTG GGATGAGCTT GTGGTTTCAA AAACCTAATG TCATGGATGC ATCGGTGGGC CTAATCATAT CACTGGCCGC TACTAGTGGA AAATACCTGG ATCCTTGTTT GAATATGCTC ATAAGTAATT TCATACAACC TACTTTTAAG CATGAAGTTT CACAAACCCA GTTAGTCAAA AAGAAGCAGG AAGTTCTTCC ACGGGTGCAT GTAGCCCTTC ACAAGATTTC TTATTTAATT CCTCTTGCTC CCTCGAAATT AGTGCCTATA CTTGCGCAGA ACATGCCTAG TATTTACGAA AAGGGCCCTT CTGTAGTGAC ATATGTGGAT AACCTGTTGA AGTTGGAGAA TAGCTCAATC GGAAAAGTTG TTGGCAGTGT GATTCTCATG ATGGTGATGG AGAGGATGCG AGATTTGGAT TTGGAAATTG GATGCGATGA TATTCTCCAA GATGACTCTA ATAGAGGCAT GTTTGATATG GAACTTGAAG ATGCAGTTGA AAGCACTATG AATGAAGGAG ACGAGTTTCC AGTGGGGGCT CTAAAACAAA ATACATCAGA TGGAAATGTG GTCTCTGAGC TGTTGGACAA ATTGATGGTC CTAACTTTTG ATCATCTTGA AACCTGTCAA AACTCTGGTC GTTTGGATGA GGTATTTGAA ATCCTCTTTC AGTCGTTTGA GAATTATATT CTGAACACAT ACAAATCAAA ATTTTCACAG TTTCTGATGT TCTATGCGTG CTCACTAGAT CCTGAATATT GTGGTGTGAG ATTTGCCAGT AAGCTGTTGG ACATATATCT CTCCAGAAAC AAACCTCGAC TTACTAGGAT GAGTGCAGTG GCTTATCTAG CTAGCTACTT GTCTCGTGGA AAGTTTTTGC CTGCTTCTTT TGTGGCTAGC ATGTTGAAAA GATTGGTGGA CGATTGTGCG GAATATTGCA GAACATGCAA TGATGATGTG AAGCCAGAAG CACATCAAGT GTTCTATTCT GGATGTCAGG CAATCTTGTA TGTGCTATGC TTCCAGATGA GATCCATACT GGACATTCCT CGCTTTCAGT TGCAGCTCAC ATCGTTGGAG TCAATTTTAT CTCACAAACT AAACCCACTG ATGGTGTGCC TTCCATCTGT AGTTTCCGAG TTCCTTAAAC AAGCCAAAGC TGGTGGTCTG TTCATTGTCT CAGAAGCCTT CATTTTCGAT GACCTACACG AGTCTGAGCT CTCTTGTGCT TTTGGTGGCT TTGAAAGGCT TGACACATTC TTCCCGTTTG ACCCGTGCTT GTTGAAAATG TCTAGCAGCT ATATCTCCCC GAACTTCAAC TTCTGGTTAA TGGAGAAAAC GACTTATGAG GAAGATGATG ACGATGAGCT TTGTGATGAG GTCATAGTGA ATGGAGATGC AGACAGTGAG GAGGACTGTG ACGATGACGT GGAACTTGAT AGCGAGATGA ATAAGATGTC TGTAACTCCG AAACACTCTT TCATGCAAGA AACGGAGAGG CTCTTGAAGA TGCCTTCAAG AATCAGACCA TCCACTAGTC CTCCTGAATC CTTCTTAATC TAA 
Length1833
Protein Sequence
Protein Residue
Map Locationscaffold_1: 13051382.. 13054901
Download Sequence
A.thaliana
AGI-codeAT1G30590.1
DescriptionRNA polymerase I specific transcription initiation factor RRN3 protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.247 Ahg316209 CCAAT-binding factor
10.9545 Ahg321151 ARM repeat superfamily protein
13.3041 Ahg495599 ribosomal protein L30 family protein
13.6748 Ahg476336 transcription factor IIIA
14.4568 Ahg311847 GTP binding Elongation factor Tu family protein
22.2261 Ahg496255 evolutionarily conserved C-terminal region 3
22.6716 Ahg480239 FAD-dependent oxidoreductase family protein
27.2397 Ahg945285
28.1425 Ahg479365 P-loop containing nucleoside triphosphate hydrolases superfamily protein
28.9828 Ahg484760 actin-related protein 6
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression