Detail



ID : Ahg321615

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|321615|fgenesh1_pm.C_scaffold_4001672
Sequence
ATGGGAGCAG AAGAAGAAGT GGACAATGCT GAGTTAAGCG ACAAAGCTTT GGTGTTAGCC ATTAGAGAGG TCCTTGCATC TGTCCAAAGT GTGAGTCTTG CACAAATGGA GACACCGATC AATATAATGT ACATTAAAAA GAAATCTGAT GGCCATGCTG TGGCACAGAA AGAGGTGCCT GAAGATGTCG ATGTTGTGGC TCAGCGAGAG ACACTCTTGA AAATTCTATC ACGCTCTGTT GTTTGCTTAG ATGAAGTTCA CCATAACCGG CTTCTTGTAC TTATTCTTGG GACGAGAATT TGGGATCACA TACCTAATGT AAATGTAATG TATGCATTGC TGGACCTAAT CGTATCACTG GCCACTACTA GTGGAAAGTA TCTGATCTCT TGTTTAAATA TGCTCGTATC TAATTTACGT TCGCAACCCC GCATACTCAA CAATAAGGAG CAGGAAGTTC TTTCCCGGGT GCACGCAGCT CTTCACAAAA TTTCGTATTT AGTTCCCCTT GCTCCCTCAA TATTACTGCC CATACTCGCC CAGGGAATGC CTAGCGTAGA CGACAAAGAC CATCTTGTAG TGCCATATGT GGAGAACTTG TTGAAGTTGG AGAACAGCTC AATCATCGGA AAAGTTGTTG GCAACGGGAT TCTTAGGGTT GTAATGGAGA GGTTGCGAGA TCTCGATTTG AAGATTGGGT GGGATGATAT ACTCCAAGAT GACTCCACCA TAGCCATGTT TGATATGGAA CTTGACCTTG CAGTTGAAGG CACTACCAAT GAAGGAGAGG AGTTTTCAGT TCGGTCTCTA AATCAAAATG GAAATGTAGT CTCTAAATCG TTGGACGATT TGATGGTCCT ATCTTTTCAT CATCTTGAAT TCTGCCAAGA TGCTGGTCGT CTGGATGAGG TGTTTGAAAA TCTGTTCGTG TCGTTTGAGA ACTTAATTCT GAACACGCAA AAAACAAAAA TTTCACAGTT CCTGATGTTC TATGCGTGCT CACTAGATCC TAAAAGTTGT GGTGTGAAAT TTGCCAGTAA GCTGTTGGAC ATATTTCTCT CCAGCAACAA ACATCAAGTT ACTAGGACGA ATGCAGTGGC TTATCTAGCT AGCTACTTGG CTCGTGCAAA GTTTTTGCCT ACTTCTTTTG TGGCTAGCAT GTTGAAAAGA TTGGTGGAGG ATTGTGCGGA TTACTGCAGA ACATGCAATG ATGATGCTAG GCCTGAAGAA CATCAAGATT TTTATTCAGG ATGTCAGGCA ATCTTGTATG TGCTATGCTT CCGAATGAGA TCAATCCTAG CTGTTCCTCG CTTCCTATCG CAGCTTACAC CATTGGAGTC GGTTTTTATC TCACAAACTA GACCCGTGTG CCTTCCATCT GTAGTTTCTG AGTTCCTTAA ACAAGCCAAA GCTGGTGGTA TGATCATTGT CTCGGAAGCC TTCATTTTTG ATGACCTACC CGAGTCTGAG CTCTCTCGTG CTTTTGGTGG ATTCTTCCCT GTTATCTCTC GGAACTTCAT CTACTGGTCA GAGGTGAAAA AGAAGACTTA TGATGAGGAT GAGTTTTTGC CGGAAGTCAT AGTGTATGGA GATACAGAGA GTGAGGAGGA TTGTGATGAT GATGATGTTG TTCTTGATAA CGAGGTGAAC AAGATGTCTA CAACTCCTAC ACACTCCTTC ATGCGCGAAA CAGAGAGACT CTTGAAGATG CCTTCGAGGA TCAGTCCATC AACTAGTCCT CGTGAATCTC TCTGA 
Length1755
Protein Sequence
Protein Residue
Map Locationscaffold_4: 18070918.. 18074356
Download Sequence
A.thaliana
AGI-codeAT1G30590.1
DescriptionRNA polymerase I specific transcription initiation factor RRN3 protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.54983 Ahg934507 RNA polymerase I specific transcription initiation factor RRN3 protein
10.0995 Ahg494156 alpha/beta-Hydrolases superfamily protein
18.9737 Ahg494408 Transducin/WD40 repeat-like superfamily protein
24.1661 Ahg312617 cytochrome P450, family 79, subfamily F, polypeptide 2
35 Ahg312200 starch synthase 3
43.359 Ahg487604 myb domain protein 29
50.8626 Ahg943308 glycosyltransferase family protein 28
58.4979 Ahg492392 HXXXD-type acyl-transferase family protein
65.1997 Ahg924340 methionine aminopeptidase 2B
75.1133 Ahg326599 2-isopropylmalate synthase 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression