Detail



ID : Ahg327981

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|327981|fgenesh1_pm.C_scaffold_7000208
Sequence
ATGGTTGCAT CATTCTCTTA CACTGCCTAC ACCAAGCTTT CTCTATTACA TCCTCCCATG GCTGCTCAAA TCCGACCAAG AACAACACAG AAGACGTTCG TAGTGACAAA TCCTGAACAA GACAGTACTC TGGAGGTACA AGAAACAGAG CCAATCAAAG AAGAGCAATC AACAGAGAAG ATGAAGAAGC AGCCAACACC ATTGAGACCA GTGGAGAAAC AACTAAACGT GAAGAGCAAA GGTATGGGCC AGTTTGGTGG TCAGTGGCTA AGCAGTGTCA CACGTCACGT TAGGATCTAC GCTGCTTATA TCGACCCCGA GACTTGTGAG TTTGACCAGT CACAAATGGA TAAACTCACT TTGATTCTTG ATCCTACTGA AGAATTTGTG TGGGATGATG AAAGCTGTAA CAAGGTCTAT TCTTATTTCC AAGAACTCGT CGATCACTAC GAGACTCCTT CAAGAAGACC TTACAATATT TACACATTAA GATTGATAGG ATCAGACGTA GAACATTACA TAAGGAAAAT GTTATTTGAT GGAGAAATAC AATACAATAT GGATGCAAGA GTTCTTAACT TCAGTATGGG AAAGCCTCGT GTTCAATTCA ATACTAGTAA CATTGAAGGT GGTGGAGATG AGGGACAAAA AATGGCGAAT TTACTGGAAA CATCAATCTT CTTCTCCTCG GCTGATAAAT TAATTTCATT CTCGTCTCAT AATTCTCAAA CCCATCTTCT CCCTTTCTCT GCTTTCATCA ATGGAGGAAG AAAGATACGC AAAAGCTCAA CTATCACCTT TGCTTCCGAC ACTGTCACTT ACAGTAGCAT CACCAGTACG GAGGTAAAAA GCTCTGTTGA GGATCCTATG GAAGTTGAGG TTGCTCAAGG CTACACTATG GCTCAGTTCT GTGACAAGAT CATTGATCTT TTTTTGAATG AGAAACCTAG AGTTAAACAA TGGAAGACTT ATTTGGTTTT AAGAGATGAA TGGAACAAGT ACAGTGTTAA TTTCTATAGG CGTTGCAGAA TCCGAGCTGA TTCCGAAACT GATCCTATAT TGAAGCAGAA GCTGTTATCT TTGGAAAGTA AAGTCAAGAA GATAGATGAG GAAATGGAGA AGCACAATGA CCTTTTGAAG GAGATTCAAG AAAACCCGAC TGACATAAAC GCAATCGCTG CCAAGAGACG TAGAGACTTC ACAGGAGAGT TTTTCCGCTA TGTTGCTTTG TTATCAGAAA CTCTTGATGG CTTAGAAGAC CGAGATGCTG TCGCAAGGCT TGCAACTAGA TGTTTATCTG CTGTGAGTGC TTATGACAAT ACATTGGAGA GTGTTGAGAC TCTAGATGCT GCTCAAGCAA AGTTTGATGA TATTTTAAAC TCTCCATCCG TGGATGCCGC TTGCGAAAAG ATCAGAAGTT TAGCCAAGTC AAAGGAGCTA GATTCTTCAT TGATCTTATT AATAAACAGT GCTTACGCTG CAGCTAAAGA GTCTCAAACC GTTACAAACG AGGCTAAAGA CGTAATGTAT CATTTATACA AAGCTACAAA GAGCAGTCTT AGAAGCATCA CACCGAAAGA GATCAAACTT TTAAAGTACT TACTCAACAT AACAGACCCC GAAGAACGAT TCTCTGCTCT AGCAACAGCA TTCTCTCCTG GCGATGACCA TGAAGCTAAG GACCCTAAAG CATTATACAC GACGCCAAAG GAGCTGCATA AGTGGATAAA GATAATGCTT GATGCATACC ATCTCAACAA AGAAGAAACT GACATTAAAG AAGCTAAACA GATGAGCCAA CCAATCGTGA TTCAGCGGCT TTTCATCCTC AAGGACACGA TCGAAGATGA GTATTTAGAC AAGAAAACAA TCGTGGCTGA TGAAAATCCA AAGAAGGAAG AAGATACATC TGTTGAAGAA TTTTTGAACT GA 
Length1932
Protein Sequence
Protein Residue
Map Locationscaffold_7: 954959.. 958757
Download Sequence
A.thaliana
AGI-codeAT4G37920.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
16.0312 Ahg484330 Hydroxyproline-rich glycoprotein family protein
22.2036 Ahg478348 lycopene cyclase
24 Ahg323421 Phox (PX) domain-containing protein
25.4558 Ahg353127 accelerated cell death 2 (ACD2)
26.4575 Ahg928035 Pentatricopeptide repeat (PPR-like) superfamily protein
29.5296 Ahg478862 Aldolase-type TIM barrel family protein
30 Ahg934248 pentatricopeptide (PPR) repeat-containing protein
31.7017 Ahg944415 Pentatricopeptide repeat (PPR) superfamily protein
32.1714 Ahg924342 haloacid dehalogenase-like hydrolase family protein
35.7491 Ahg493244
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression