Detail



ID : Ahg333180

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|333180|fgenesh1_pm.C_scaffold_103000004
Sequence
ATGGAAGCTA ATTCCGGCGG AGGAGCTGAA GGCGGAAGAG CGGCAACCGG AGGAGGAGGA GGGAGCGATG TGGAATTGGT GAGCAAGACG TTGCAAGTGG AGCATAAGCT TTTCTATTTT GATCTTAAGG AGAATCCTCG TGGAAGGTAT CTAAAGATAT CGGAGAAGAC GTCGGCGACG AGGTCAACCA TCATTGTTCC TTCCTCCGGC ATCTCTTGGT TCCTTGATCT CTTCAATTAC TATGTCAATT CTGAGGAACA CGAGCTTTTT AGCAAAGAAT TGCAGCTTGA TTCCAAGGTG TTTTACTTCG ACATTGGTGA GAACAGAAGA GGACGCTTCT TGAAGGTGTC AGAAGCATCG GTTAGTAGAA ATCGAAGTAC CATTATTGTT CCAGCTGGAA GCTCTCCTGA TGAAGGATGG GCAGCTTTCA GGAATATATT GGCTGAGATT CATGAAGCAT CAGGACTTTT TGTGATGCCA AATAAGGTGA AACCTTCTGA TGGACAGGAA CACTTGGTTG ATGATGTTGG GGCTGGATTT ATACCTGGCC ATGGTAGTCA GCAGCCATCT TCTTCAGAAC ATAATGTGGA TCGATCAGTT GACTCGCCAG GCCAGGAAGA AACTGTTTCT AAAGTAATCA GAGCTGACCA GAAACGGTTC TTCTTTGATC TTGGGAACAA TAACAGGGGC CATTTCCTGA GGATATCTGA GGTAGCAGGT TCTGACAGGT CTTCCATCAT TCTACCGTTA TCGGGTCTTA AGCAGTTTCA CGAAGTAATT GGTCACTTTG TGGAGATCAC CAAAGATAAG ATTGAAGGTA TGACGGGTGC AAATGTCAGG ACAGTTGATC CTCCTCAGAG ATGA 
Length864
Protein Sequence
Protein Residue
Map Locationscaffold_4: 14399274.. 14400598
Download Sequence
A.thaliana
AGI-codeAT2G32080.1
Descriptionpurin-rich alpha 1
TAIR curator summarysimilar to the conserved animal nuclear protein PUR alpha which was implicated in the control of gene transcription and DNA replication
Alias[PUR ALPHA-1][purin-rich alpha 1]
Gene coexpression
MR
MR Locus Description
0 Ahg901018 purin-rich alpha 1
14.7648 Ahg476649 J-domain protein required for chloroplast accumulation response 1
15.2315 Ahg931380 Protein of unknown function (DUF810)
23.3666 Ahg495103 exocyst subunit exo70 family protein F1
25.2587 Ahg496448 Tic22-like family protein
28.6182 Ahg482789 Protein kinase superfamily protein
34.0734 Ahg332599 Protein of unknown function (DUF626)
34.7563 Ahg495719 peroxin 5
35.4965 Ahg921284 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
37.9868 Ahg941687 P-type ATPase of Arabidopsis 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression