| Annotation |
|---|
| Description | jgi|Araly1|333812|fgenesh1_pg.C_scaffold_1000377 |
| Sequence |
ATGAGCATTG TACCTAAGGA AACGGTGGAG GTAATAGCTC AAAGTATTGG GATTACCAAC TTGTTACCTG AAGCTGCTCT TATGCTTGCT CCTGATGTCG AGTATCGTGT CCGAGAGATC ATGCAGGAAG CTATCAAATG CATGCGTCAT TCAAAGAGAA CGACTTTAAC AGCTTCGGAT GTAGATGGTG CTCTCAACTT GAGGAACGTT GAGCCGATAT ATGGCTTTGC CTCAGGAGGA CCATTTCGTT TTAGAAAAGC TATTGGGCAT CGCGATTTGT TCTACACTGA TGACAGAGAA GTGGATTTCA AAGATGTGAT CGAAGCCCCG CTACCAAAAG CTCCCCTTGA TACTGAAATT GTTTGTCACT GGCTGGCTAT TGAAGGAGTG CAACCAGCTA TACCAGAAAA TGCTCCTTTA GAAGTCATTA GAGCACCTGC AGAAAACAAA ATCCATGAAC AAAAAGACGG ACCTCCTATT GACGTTAGGC TACCAGTAAA GCATGTACTA TCTAGGGAAC TTCAGTTATA CTTCCAAAAG ATTGCTGAAC TTGCAATGAG CAAGTCAAAT CCTGCTCTGT TTAAAGAAGC ATTAGTGAGC TTGGCCTCAG ACTCCGGACT TCATCCTCTA GTTCCATATT TTACAAATTT CATTGCTGAT GAGGTAACAT TATGCACCAC CAAGGTTTCA AATGGTTTAA AAGACTTTCG ACTCCTGTTT AATCTAATGC ACATTGTTAG AAGTCTTCTA CAGAATCCTC ACATAAACAT AGAACCTTAT CTGTACCAGT TGATGCCATC TGTTGTAACG TGCCTTGTAT CAAGAAAGCT TGGAAATAGA TTTGCTGACA ACCATTGGGA ACTCAGAGAT TTTGCGTCAA ATCTGGTTGC ACTGATATGT AAAAGGTACG GACCCGTTTA TATTACTCTT CAGTCTCGTC TTACAAGAAC TTTAGTCAAT GCACTGTTGG ACCCAAAGAA AGCTTTGACT CAGCACTATG GTGCAATTAG AGGATTAGCA GCTTTGGGGC ACAATATTGT ACGCCTTTTA ATTCTATCAA ATCTCGAACC GTATCTAAGT CTTCTCCAAC CTGAATTGGA TGCTGAGAAG CAAAAAAATC AGATGAAGAA CTACGAAGCT TGGTGTGTAT ATGGAGCCTT GCTGCGAGCT GCAGGCTTGT GTATACATGA CCGGCTTAAA ATCTTCCCAC CTTTACCATC TCCATCACCA AGTTTCCTCC ATAAGGGAAA GGGAAAGATA ATCAATACTG ATCCCCACAA GCGGAAGCTG AGCATAGATT CTTCAGAAAA CCAATCGCCA CAGAAAAGAT TGATAACCAT GGATGGGCCA GATGGTGTGC AATCACAAGA TCAATCCGGC TCAGCTCCAA TGCAAGTAGA TAATCCAGTG GAAAATGACA ATCCGCCACA AAACTCTGTT CAGCCATCCT CATCAGAACA AGCTTCTGAT GCTAACGAAT CTGAAAGCAG AAATGGAAAG GTGAAAGAAA GCGGTAGGAG TCGGGCTATT ACCATGAAAG CAATCCTTGA TCAGATATGG AAAGATGATC TTGATTCCGG ACGGCTATTG GTGAAACTGC ACGAACTCTA TGGTGATAGG ATTCTTCCCT TTATCCCTTC TACAGAGATG TCAGTATTCC TCTAA |
| Length | 1665 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 1594303.. 1597856 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G04950.1 |
| Description | TATA BOX ASSOCIATED FACTOR II 59 |
| TAIR curator summary | Encodes one of two Arabidopsis proteins with significant similarity to the histone fold TBP-associated factor TAF6. Mutants are embryo lethal and transmission of the mutant allele through the male gametophyte is significantly reduced. This is due to reduced pollen tube growth of the mutant. |
| Alias | [ATTAF6][EMB2781][TAF6][TAFII59][EMBRYO DEFECTIVE 2781][TBP-associated factor 6][TATA BOX ASSOCIATED FACTOR II 59] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 16.0312 |
Ahg357624 | |
| 18.1108 |
Ahg491578 | UDP-N-acetylglucosamine (UAA) transporter family |
| 43.9545 |
Ahg495283 | Protein of unknown function (DUF2930) |
| 49.295 |
Ahg495780 | CwfJ-like family protein / zinc finger (CCCH-type) family protein |
| 51.2055 |
Ahg937058 | |
| 54.6809 |
Ahg478579 | NIMA-related kinase 7 |
| 63.7181 |
Ahg480099 | ADP-glucose pyrophosphorylase family protein |
| 65.4981 |
Ahg896262 | AGAMOUS-like 30 |
| 66.106 |
Ahg945436 | Uncharacterised conserved protein UCP022280 |
| 77.1298 |
Ahg487674 | Transducin/WD40 repeat-like superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|